Publications

2018

  • Kim, J.D., Pike, D.H., Tyryshkin, A.M., Swapna, G.V.T., Raanan, H., Montelione, G.T., Nanda, V. and Falkowski, P.G., 2018. Minimal heterochiral de novo designed 4Fe-4S binding peptide capable of robust electron transfer. Journal of the American Chemical Society. 140(36), 11210–11213.(Link)
  • Moore, E.K., Hao, J., Prabhu, A., Zhong, H., Jelen, B.I., Meyer, M., Hazen, R.M. and Falkowski, P.G., 2018. Geological and chemical factors that impacted the biological utilization of cobalt in the Archean eon. Journal of Geophysical Research: Biogeosciences, 123(3), pp.743-759.(Link)
  • Raanan, H., Pike, D.H., Moore, E.K., Falkowski, P.G. and Nanda, V., 2018. Modular origins of biological electron transfer chains. Proceedings of the National Academy of Sciences, 115(6), 1280–1285. https://doi.org/10.1073/pnas.1714225115 (Link)
  • Jelen, B., Giovannelli, D., Falkowski, P.G. and Vetriani, C., 2018. Elemental sulfur reduction in the deep‐sea vent thermophile, Thermovibrio ammonificans. Environmental Microbiology. doi:10.11111462-2920.14280(Link)
  • Drake, J.L., Schaller, M.F., Mass, T., Godfrey, L., Fu, A., Sherrell, R.M., Rosenthal, Y. and Falkowski, P.G., 2018. Molecular and geochemical perspectives on the influence of CO2 on calcification in coral cell cultures. Limnology and Oceanography, 63(1), pp.107-121. (Link)
  • Falkowski, P.G., 2018. Reverse Engineering Nature. Environmental microbiology.  (Link)
  • Sheyn, U., Rosenwasser, S., Lehahn, Y., Barak-Gavish, N., Rotkopf, R., Bidle, K.D., Koren, I., Schatz, D. and Vardi, A., 2018. Expression profiling of host and virus during a coccolithophore bloom provides insights into the role of viral infection in promoting carbon export. The ISME journal, 12(3), p.704.(Link)
  • Behrenfeld, M.J., R. Moore, C.A. Hostetler, J. Graff, P. Gaube, L. Russell, G. Chen, S.C. Doney, S. Giovannoni, H. Liu, C. Proctor, L. Bolaños, N. Huynh, C. Davie-Martin, T. Westberry, T.S. Bates, T.G. Bell, K.D. Bidle, E.S. Boss, S.D. Brooks, B. Cairns, C. Carlson, K. Halsey, E.L. Harvey, C. Hu, L. Karp-Boss, M. Kleb,  S. Menden-Deuer, P.K. Quinn, A.J. Scarino, B. Anderson, J. Chowdhary, E. Crosbie, R. Ferrare, J.W. Hair, Y. Hu, S. Janz, J. Redemann, E. Saltzman, M. Shook, D.A. Siegel, L. Ziemba.. The North Atlantic Aerosol and Marine Ecosystem Study (NAAMES): Science motive and mission overview. Front. Mar. Sci. (in review)
  • Seth-Pasricha, M., S. Senn, L. Sanman, M. Bogyo, V. Nanda, K.A. Bidle and K.D. Bidle. Catalytic linkage between caspase activity and proteostasis in Archaea. Environ Microbiol. (in press) DOI:10.1111/1462-2920.14456
  • Schieler, B.M., M.V. Soni, C.M. Brown, M.J.L. Coolen, H. Fredricks, B,A.S. Van Mooy, D.J. Hirsh, and K.D. Bidle. Nitric oxide production and antioxidant function during viral infection of the coccolithophore Emiliania huxleyi. ISME J. (in revision)
  • Nissimov, J.I, D. Talmy, L. Haramaty, H. Fredricks, U. Zelzion, M. Eren, R. Vandzura, C. Laber, B. Schieler, C. Johns, K.D. More, M.J.L. Coolen, M.J. Follows, D. Bhattacharya, B.A.S. Van Mooy and K.D. Bidle. Biochemical diversity of sphingolipid biosynthesis as a driver of algal-virus competitive ecology. PNAS (in revision)
  • Nissimov, J.I., Vandzura, R., Johns, C.T., Natale, F., Haramaty, L. and Bidle, K.D., 2018. Dynamics of transparent exopolymer particle (TEP) production and aggregation during viral infection of the coccolithophore, Emiliania huxleyi. Environmental Microbiology. (Link)
  • Pasulka, A.L., Thamatrakoln, K., Kopf, S.H., Guan, Y., Poulos, B., Moradian, A., Sweredoski, M.J., Hess, S., Sullivan, M.B., Bidle, K.D. and Orphan, V.J., 2018. Interrogating marine virus‐host interactions and elemental transfer with BONCAT and nanoSIMS‐based methods. Environmental microbiology, 20(2), pp.671-692.(Link)
  • Shen, U., S. Rosenwasser, Y. Lehahn, N. Barak-Gavish, R. Rotkopf, K.D. Bidle, I. Koren, D. Schatz, A. Vardi. 2018. Expression profiling of host and virus during a coccolithophore bloom provides insights into the role of viral infection in promoting carbon export. ISME Journal 12:704–713
  • Spungin, D., G. Rosenberg, K.D. Bidle, I. Berman-Frank. Metacaspase involvement in programmed cell death of the marine cyanobacterium Trichodesmium. Environ. Microbiol. (in revision)
  • Johns, C.T., Grubb, A., Nissimov, J.I., Natale, F., Knapp, V., Mui, A., Fredricks, H., Van Mooy, B.A. and Bidle, K.D., 2018. The mutual interplay between calcification and coccolithovirus infection. Environmental microbiology.(Link)
  • Laber, C.P., Hunter, J.E., Carvalho, F., Collins, J.R., Hunter, E.J., Schieler, B.M., Boss, E., More, K., Frada, M., Thamatrakoln, K. and Brown, C.M., 2018. Coccolithovirus facilitation of carbon export in the North Atlantic. Nature microbiology, 3(5), pp.537-547. (Link)
  • Thamtrakoln, K., D. Talmy, L. Haramaty, C. Maniscalco, J. Latham, B. Knowles, F. Natale, M. Coolen, M.J. Follows and K.D. Bidle. 2018. Light regulation of coccolithophore host-virus interactions. New Phycologist. (in press); DOI: 10.1111/nph.15459
  • Bittar, T.B., U. Passow, L. Haramaty, K.D. Bidle and E.L. Harvey. 2018. An updated method for the calibration of transparent exopolymer particle measurements. Limnol. Oceanogr. Methods 16:621–628
  • Schofield, O., Brown, M., Kohut, J., Nardelli, S., Saba, G., Waite, N. Ducklow, H. 2018. Changes in upper ocean mixed layer and phytoplankton productivity along the West Antarctic Peninsula. Philosophical Transactions of the Royal Society. doi 10.1098/rsta.2017.0173 (Link)
  • McDonnell, J., deCharon, A., Lichtenwlaner, S. C., Hunter-Thomson, K., Halversen, C., Schofield, O., Glenn, S., Ferraro, C., Lauter, C., Hewlett, J. 2018. Education and public engagement in OOI: Lessons learned from the field. Oceanography 191: 118-126. (Link)
  • Schofield, O., Glenn, S., Kohut, J., Miles, T., Roarty, H., Saba, G., McDonnell, J. 2018. Developing practical data skills in undergraduate students using ocean observatories. Marine Technology Society 52(1): 1-7. (Link)
  • Kim, H., Ducklow, H. W., Abele, D., Bartlett, E., Buma, A. G., Meredith, M. P., Rozema, P. D., Schofield, O., Venables, H. J., Schloss, I. R. 2018. Interdecadal variability of the phytoplankton biomass along the coastal West Antarctic Peninsula. Philosophical Transactions of the Royal Society. doi 1098/rsta2017.0049 (Link)
  • Ramos, A. G., Garcia-Garrido, V. J., Mancho, A. M., Wiggins, S., Coca, J., Glenn, S., Schofield, O., Kohut, J., Aragon, D., Kerfoot, J., Haskins, T., Miles, T. N., Haldeman, C., Standskov, N., Allsup, B., Jones, C., Shapiro, J. 2018. Lagrangian coherent structure assisted path planning for transoceanic autonomous underwater vehicle missions. Scientific Reports doi: 10.1038/s41598-018-23028-8 (Link)
  • Ducklow, H. W., Stukel, M. R., Eveleth, R., Doney, S. C., Jickells, T., Schofield, O., Baker, A. R., Brindle, J, Chance, R., Cassar, N. 2018. Spring-summer net community production, new production, particle export and related water column biogeochemical processes in the marginal sea ice zone of the Western Antarctic Peninsula 2012-2014. Philosophical Transactions of the Royal Society doi: 10.1098/rsta.2017.0177 (Link)
  • Greer, A. T., Shiller, A. M., Hofmann, E. E., Wiggert, J. D., Warner, S. J., Parra, S. M., Pan, C., Book, J. W., Joung, D. J., Dykstra, S., Kruase, J. W., Dzwonkowski, B., Soto, I. M., Cambazoglu, K., Deary, A. L., Briseno-Avena, C., Boyette, A. D., Kastler, J. A., Sanial, V., Hode, L., Nwankwo, U., Chiaverano, L. M., O’Brien, S. J., Fitzpatrick, P. J., Lau, Y. H., Dinniman, M. S., Martin, K. M., Ho, P., Mojzis, A. K., Howden, S. D., Hernandez, F. J., Church, I., Miles, T. N., Sponaugle, S., Moum, J. N., Arnone, , R. A., Cowen, R. K., Jacobs, G. A., Schofield, O., Graham. W. M. 2018. Functioning of coastal river-dominated ecosystems and implications for oil spill response: From observations to mechanisms and models. Oceanography. 31(3) doi.org/10.5670/oceanog.2018.302.(Link)
  • Schofield, O., Kohut, J. 2018. Sampling the Southern Ocean. Antarctuic Environments Portal. DOI:10.18124/D4863P. (Link)

2017

  • Moore EK, Jelen BI, Giovannelli D, Raanan H, Falkowski PG. Metal availability and the expanding network of microbial metabolisms in the Archaean eon. Nature Geoscience,  10(9), p.629.(Link)
  • Nissimov J.I., Pagarete A., Ma F., Cody S., Dunigan D.D., Kimmance S.A. & Allen M.J. 2017. Coccolithoviruses: a review of genomic thievery and metabolic thugger. Viruses, 9 (3), 52; doi:10.3390/v9030052.
  • Bailleul, B., Park, J., Brown, C.M., Bidle, K.D., Lee, S.H. and Falkowski, P.G., 2017. Direct measurements of the light dependence of gross photosynthesis and oxygen consumption in the ocean. Limnology and Oceanography.(Link)
  • Nissimov, J.I. and Bidle, K.D., 2017. Stress, death, and the biological glue of sinking matter. Journal of phycology, 53(2), pp.241-244.(Link)
  • Park, J., Kuzminov, F.I., Bailleul, B., Yang, E.J., Lee, S., Falkowski, P.G. and Gorbunov, M.Y., 2017. Light availability rather than Fe controls the magnitude of massive phytoplankton bloom in the Amundsen Sea polynyas, Antarctica. Limnology and Oceanography.(Link)
  • Liu, W., Yee, N., Piotrowiak, P. and Falkowski, P.G., 2017, December. Photogeochemical reactions of manganese under anoxic conditions. In AGU Fall Meeting Abstracts.
  • Putnam, H.M., Adams, D.K., Zelzion, E., Wagner, N.E., Qiu, H., Mass, T., Falkowski, P.G., Gates, R.D. and Bhattacharya, D., 2017. Divergent evolutionary histories of DNA markers in a Hawaiian population of the coral Montipora capitata. PeerJ, 5, p.e3319.(Link)
  • Von Euw, S., Zhang, Q., Manichev, V., Murali, N., Gross, J., Feldman, L.C., Gustafsson, T., Flach, C., Mendelsohn, R. and Falkowski, P.G., 2017. Biological control of aragonite formation in stony corals. Science, 356(6341), pp.933-938.(Link)
  • Nissimov, J.I and K.D. Bidle. 2017. Stress, death and the biological glue of sinking matter. J. Phycol. 53, 241–244.
  • Brussaard, C.P.D., K.D. Bidle, C. Pedrós-Alió, and C. Legrand. 2016. The interactive microbial ocean. Nature Microbiol. 2: 16255
  • Carvalho, F., Kohut, J., Oliver, M. J., Schofield, O. 2017.  Defining ecological relevant mixed layer depths in Antarctica’s coastal seas. Geophysical Research Letters. 44, doi:10.1002/2016GL071205(Link)
  • Schofield, O., Saba, G., Coleman, K., Carvalho A-F., Couto, N., Finkel, Z., Irwin, A., Kahl, A., Montes-Hugo, M.. Waite, N. 2017. Decadal variability phytoplankton community composition in the coastal waters of a warming West Antarctic Peninsula. Deep Sea Research Part I, Volume 124, p. 42-54. doi/10.1016/j.dsr.2017.04.014 (Link)
  • Benard, K. S., Cimino, M., Fraser, W., Kohut, J., Oliver, M., Patterson-Fraser, D., Schofield, O., Statscewich, H., Steinberg, D. K., Winsor, P. 2017. Factors that affect the nearshore aggregations of Antarctic krill in a biological hotspot. Deep Sea Research II. doi/10.1016/j.dsr.2017.05.008(Link)
  • Seroka, G., Miles, T., Xu, Y., Kohut, J., Schofield, O., Glenn, S. 2017. Rapid shelf-wide cooling response of a stratified coastal ocean to hurricanes. Journal of Geophysical Research DOI 10.1002/2017JC012756(Link)
  • Couto, N., Martinson, D., Kohut, J., Schofield, O. 2017. Distribution of Upper Circumpolar Deep Water on the warming continental shelf of the West Antarctic Peninsula. Journal of Geophysical Research DOI:10.1002/2017JC012840(Link)
  • Annett, A. L., Fitzsimmons, J., Séguret, M., Lagerström, Meredith, M., Schofield, O., Sherrell, R. M. 2017. Controls on dissolved and particulate iron distributions in surface waters of the Western Antarctic Peninsula shelf. Marine Chemistry DOI: 10.1016/j.marchem.2017.06.004(Link)
  • Dinamarca, J., Levitan, O., Kumaraswamy, G.K., Lun, D.S. and Falkowski, P., 2017. Overexpression of a diacylglycerol acyltransferase gene in Phaeodactylum tricornutum directs carbon towards lipid biosynthesis. Journal of Phycology. 53(2), pp.405-414.(Link)
  • Hendry, K., Henley, S., Schofield O. 2017. Understanding a changing West Antarctic Peninsula. EOS, 98: (Link) https://doi.org/10.1029/2017EO084155.

2016

  • Bhattacharya, D., Agrawal, S., Aranda, M., Baumgarten, S., Belcaid, M., Drake, J. L., Falkowski, P.G. … & Kamel, B. 2016. Comparative genomics explains the evolutionary success of reef-forming corals. eLife, 5, e13288. (Link)
  • Spungin, D., U. Pfreundt, H. Berthelot, S. Bonnet, D. AlRoumi, F. Natale, W.R. Hess, K.D. Bidle, and I. Berman-Frank.2016. Mechanisms of Trichodesmium bloom demise within the New Caledonia Lagoon. Biogeosciences 13: 4187–4203. (Link)
  • Hirsh, D.J., K.M. Fomchenko, E.M. Jordan, B. Schieler, and K.D. Bidle. 2016. A liposome-encapsulated spin trap for the detection of nitric oxide. Free Radic. Biol. Med. 16: 199-210 (Link)
  • Bidle, K.D. 2016. Programmed cell death in unicellular phytoplankton. Curr. Biol. 26(13): R594–R607 (Link)
  • Brussaard, C.P.D., K.D. Bidle, C. Pedrós-Alió, and C. Legrand. 2016. The interactive microbial ocean. Nature Microbiol. 2: 16255 (Link)
  • Nissimov J.I. & Bidle K.D.  2016. Stress, death, and the biological glue of sinking matter.  Journal of Phycology, 53 (2), 241–244.(Link)
  • Nissimov J.I., Napier J.A., Allen M.J. & Kimmance S.A. 2016. Intragenus competition between coccolithoviruses: an insight on how a select few can come to dominate many. Environmental Microbiology, 18(1), 133–145.(Link)
  • Seroka, G., Miles, T., Xu, Y., Kohut, J., Schofield, O., Glenn, S. 2016. Hurricane Irene (2011) Hurricane Irene sensitivity to stratified coastal ocean cooling. 2016. Monthly Weather Review http://dx.doi.org/10.1175/MWR-D-15-0452.1
  • Schofield, O., Newman, L., Bricher, P., Constable, A., Swart, S., Wahlin, A. 2016. Moving towards implementation of a Southern Ocean Observing System.  Marine Technology Society 50(3): 63-68.(Link)
  • Carvalho, F., Kohut, J., Oliver, M. J., Sherrell, R. M., Schofield, O. 2016. Mixing and phytoplankton dynamics in a submarine canyon in the West Antarctic Peninsula. Journal of Geophysical Research DOI: 10.1002/2016JC011650. (Link)
  • Obryk, M. K., Doran, P. T., Friedlaender, A. S., Gooseff, M., Priscu, J. C., Schofield, O., Stammerjohn, S. E., Steinberg, D. K., Ducklow, H. W. 2016. Responses of Antarctic marine and freshwater ecosystems to changing ice conditions. Bioscience 66: 864-879. doi:10.1093/biosci/biw109 (Link)
  • Yager, P. L., Sherrell, R. M., Stammerjohn S. E., Ducklow, H. W., Schofield, O., Ingall, E. D., Wilson, S. E., Lowry, K. E., Williams, C. M., Riemann, L., Bertilsoosn, S., Nielsen, T. G., Alderkamp, A-C., Dinaquet, J., Kjellerup, S., Logares, R., Melara, A. J., Mu, L., Newstead, R. G., Post, A., Richert, I., Swalethorp, R., van Dijken, G. 2016. A carbon budget for the Amundsen Sea Polynya, Antarctica: Estimating net community production and export in a highly productive polar ecosystem. Elementa: Science of the Anthropocene. doi: 10.12952/journal.elementa.000140 (Link)
  • Mass, T., Putnam, H. M., Drake, J. L., Zelzion, E., Gates, R. D., Bhattacharya, D., & Falkowski, P. G. 2016. Temporal and spatial expression patterns of biomineralization proteins during early development in the stony coral Pocillopora damicornis. Proceedings of the Royal Society B-Biological Sciences, 283(1829), 10. doi: 10.1098/rspb.2016.0322 (Link)
  • Jelen, B. I., Giovannelli, D., & Falkowski, P. G. 2016. The Role of Microbial Electron Transfer in the Coevolution of the Biosphere and Geosphere. Annual Review of Microbiology, 70, pp. 45-62. (Link)
  • Kim, J., Fabris, M., Baart, G., Kim, M. K., Goossens, A., Vyverman, W., Falkowski, P.G. & Lun, D. S. 2016. Flux balance analysis of primary metabolism in the diatom Phaeodactylum tricornutum. The Plant Journal, 85(1), 161-176. (Link)
  • Lin H., Kuzminov F.I., Park J., Lee S.H., Falkowski P.G., and Gorbunov M.Y. 2016. The fate of photons absorbed by phytoplankton in the global ocean – Science, 351(6270), pp. 264-267. (Link)
  • Glenn, S. M., Miles, T. N., Seroka, G. N., Xu, Y., Yu, F., Forney, R. K., Roarty, H., Schofield, O., Kohut, J. 2016. Stratified coastal ocean interactions with tropical cyclones. Nature Communications DOI:10.1038/ncomms10887 (Link)
  • Newmann, L., Schofield, O., Wahlin, A., Constaple, A., Swart, S., Williams, M., Mazloff, M., Firing, Y., Bricher, P. 2016. Understanding the Southern Ocean through sustained observations. Bulletin of the Australian Meteorological and Oceanographic Society. 28: 170-174.(Link)
  • Constaple, A. J., Costa, D. P., Schofield, O., Newman, L., Urban, E. R., Fulton, B., Melbourne-Thomas, J., Ballerini, T., Boyd, P. W., Brandt, A., de la Mare, B., Edwards, M., Eleaume, M., Emmerson, L., Fennel, K., Fielding, S., griiths, H., Gutt, J., Hindell, M. A., Hofmann, E. E., Jennings, S., Jensen, O., Kohut, J., La, H., Manderson, J., McCurdy, A., Mitchell, G., Moltmann, T., Muelbert, M., Murphy, E., Press, T., Raymond, B., Reid, K., Reiss, C., Rice, J., Salter, I., Smith, D., Song, S., Southwell, C., Swadling, K., Van de Putte, A., Willis, Z. Determining essential variables (ecosystem Essential Ocean Variables – eEOVs) for observing dynamics and change in marine ecosystems using the Southern Ocean as a case study. Journal of Marine System Journal of Marine Systems, doi: 10.1016/j.jmarsys.2016.05.003 (Link)
  • Li, Z., Cassar, N., Huang, K., Schofield, O., Ducklow, H. 2016. Interannual variability in net community production at the Western Antarctic Peninsula region (1997-2014). Journal of Geophysical Research DOI:10.1002/2015JC011378 (Link)
  • Vittadello, M., Woronowicz, K., Chhowalla, M., Falkowski, P.G. and Harrold Jr, J.W., Research Foundation of The City University Of New York and Rutgers, 2016. Chemically Modified Graphene. U.S. Patent Application 15/155,695.
  • Harel, A., Häggblom, M.M., Falkowski, P.G. and Yee, N., 2016. Evolution of prokaryotic respiratory molybdoenzymes and the frequency of their genomic co-occurrence. FEMS microbiology ecology, 92(12), p.fiw187.(Link)

2015

  • Levitan, O., Dinamarca, J., Zelzion, E., Gorbunov, M. Y., & Falkowski, P. G. 2015. An RNAi knock‐down of nitrate reductase enhances lipid biosynthesis in the diatom Phaeodactylum tricornutum. The Plant Journal. (Link)
  • Bailleul, B., Berne, N., Murik, O., Petroutsos, D., Prihoda, J., Tanaka, A., Falkowski, P.G.… & Finazzi, G. 2015. Energetic coupling between plastids and mitochondria drives CO2 assimilation in diatoms. Nature, 524(7565), 366-369. (Link)
  • Falkowski, P. G. 2015. From Light to Life. Origins of Life and Evolution of Biospheres, 45(3), 347-350 (Link)
  • Casey, J. R., Falkowski, P. G., & Karl, D. M. 2015. Substrate selection for heterotrophic bacterial growth in the sea. Marine Chemistry. (Link)
  • McNutt, M. K., Abdalati, W., Caldeira, K., Doney, S. C., Falkowski, P. G., Fetter, S., … & Wilcox, J. 2015. Climate Intervention: Carbon Dioxide Removal and Reliable Sequestration (Link)
  • Cermeno, P., Falkowski, P. G., Romero, O. E., Schaller, M. F., & Vallina, S. M. 2015. Continental erosion and the Cenozoic rise of marine diatoms. Proc Natl Acad Sci U S A, 112(14), 4239-4244. doi: 10.1073/pnas.1412883112 (Link)
  • Harel, A., Karkar, S., Cheng, S., Falkowski, P. G., & Bhattacharya, D. 2015. Deciphering Primordial Cyanobacterial Genome Functions from Protein Network Analysis. Current Biology, 25(5), 628-634. doi: 10.1016/j.cub.2014.12.061 (Link)
  • Levitan, O., Dinamarca, J., Zelzion, E., Lun, D. S., Guerra, L. T., Kim, M. K., . . . Falkowski, P. G. (2015). Remodeling of intermediate metabolism in the diatom Phaeodactylum tricornutum under nitrogen stress. Proc Natl Acad Sci U S A, 112(2), 412-417. doi: 10.1073/pnas.1419818112 (Link)
  • Tuorto, S. J., Brown, C. M., Bidle, K. D., McGuinness, L. R., & Kerkhof, L. J. (2015). BioDry: An Inexpensive, Low-Power Method to Preserve Aquatic Microbial Biomass at Room Temperature. PloS one, 10(12), e0144686. (Link)
  • Collins, J.R., B.R. Edwards, K. Thamatrakoln, J.R. Valdes, J.E. Ossolinski, G.R. DiTullio, K.D. Bidle, S.C. Doney, R.G. Keil, and B.A.S. Van Mooy. 2015. The multiple fates of sinking particles in the North Atlantic Ocean. Global Biogeochem. Cycles 29 (9): 1471–1494. (Link)
  • Harvey, E.L., K.D. Bidle and M.D. Johnson. 2015. Consequences of strain variability and calcification in Emilania huxleyi on microzooplankton grazing. J. Plankton Research 37(6): 1137–1148.(Link)
  • Sharoni, S., M. Trainic, D. Schatz, Y. Lehahn, J.M. Flores, K.D Bidle, S. Ben-Dor, Y. Rudich, I. Koren, A.Vardi. Infection of bloom-forming phytoplankton by aerosolized marine viruses. 2015. Proc. Natl. Acad. Sci. USA 112(21): 6643-6647.(Link)
  • Edwards, B.R., K.D. Bidle, and B.A.S. Van Mooy. 2015. Dose-dependent polyunsaturated-aldehyde regulation of microbial activity on sinking particles in the ocean Proc. Natl. Acad. Sci. USA 112(19): 5909-5914. (Link)
  • Bidle, K.D. 2015. The molecular ecophysiology of programmed cell death in marine phytoplankton. Annu. Rev. Mar. Sci., 7: 341-375. (Link)
  • Cavnaugh, M., Abdala, F. N., Ducklow, H., Glover, D., Fraser, W., Martinson, D., Stammerjohn, S., Schofield, O., Doney, S. 2015. Effect of continental shelf canyons on phytoplankton biomass and community composition along the western Antarctic Peninsula. Marine Ecology Progress Series. doi: 10.3354/MEPS11189Steinberg, D. M., Ruck, K. E., Gleiber, M., Garzio, L., Cope, J. S., Bernard, K. S., Stammerjohn, S. E., Schofield, O., Quetin, L. B., Ross, R. M. 2015. Long-term (1993-2013) changes in macrozooplankton off the Western Antarctic Peninsula. Deep Sea Research II. doi:10.1016/j.dsr.2015.02.009 (Link)
  • Brum, J. R., Hurwitz, B. L., Schofield, O., Ducklow, H. W., Sullivan, M. B. 2015. Seasonal time bombs: Dominant temperate viruses affect Southern Ocean microbial dynamics. The ISME Journal. doi:10.1038/ismej.2015.125 (Link)
  • Schofield, O., Miles, T., Aldercamp A-C, Lee, S, Haskin. C., Roaglsky E., Sipler, R., Sherrell R., Yager, P. 2015.  In situ phytoplankton distributions in the Amundsen Sea polynya measured by autonomous gliders. Elementa: Science of the Anthropocene. doi: 10.12952/journal.elementa.000073 (Link)
  • Stukel, M. R., Asher, E., Couto, N., Schofield, O., Strebel, S., Tortell, P., Ducklow, H. W. 2015. The imbalance of new and export production in the Western Antarctic Peninsula, a potentially “leaky” ecosystem. Global Biogeochemical Cycles. Doi:10.1002/2015GB005211 (Link)
  • Alderkamp, A-C., van Dijken, G. L., Lowry, K. E., Connelly, T. L., Lagerstrom, M., Sherrell, R. M., Haskins, T., Rogalsky, E., Schofield, O., Stammerjohn, S. E., Yager, P. L., Arrigo, K. R. 2015. Iron availability drives phytoplankton photosynthesis rates in the Amundsen Sea Polynya, Antarctica. Elementa. doi: 10.12952/journal.elementa.000043 (Link)
  • Steinberg, D. M., Ruck, K. E., Gleiber, M., Garzio, L., Cope, J. S., Bernard, K. S., Stammerjohn, S. E., Schofield, O., Quetin, L. B., Ross, R. M. 2015. Long-term (1993-2013) changes in macrozooplankton off the Western Antarctic Peninsula. Deep Sea Research II. doi:10.1016/j.dsr.2015.02.009 (Link)
  • Brum, J. R., Hurwitz, B. L., Schofield, O., Ducklow, H. W., Sullivan, M. B. 2015. Seasonal time bombs: Dominant temperate viruses affect Southern Ocean microbial dynamics. The ISME Journal. doi:10.1038/ismej.2015.125 (Link)
  • Gleiber, M. R., Steinberg, D. K., Schofield, O. 2015. Copepod summer grazing impact and fecal pellet production along the Western Antarctic Peninsula. Journal of Plankton Research doi:10.1093/plankt/fbv070 (Link)
  • Meredith, M., Lee, S., Wåhlin, A., Schofield, O., Ducklow, H., Newman, L, Lee, H. 2015. The interdisciplinary marine system of the Amundsen Sea, Southern Ocean: recent advances and the need for sustained observations. Deep Sea Research Part II Topical Studies in Oceanography DOI: 10.1016/j.dsr2.2015.12.002 (Link)
  • Kuzminov F.I., M. Y. Gorbunov, 2015. Energy dissipation pathways in Photosystem 2 of the diatom, Phaeodactylum tricornutum, under high-light conditions. Photosynth. Res., 2016 Feb;127(2):219-35. doi: 10.1007/s11120-015-0180-3. Epub 2015 Jul 29. (Link)

2014

  • Marie-Mathilde Perrineau, M.M., Zelzion, E., Gross, j., Price, D., Boyd, J., Levitan, O., Bhattacharya, D. Using natural selection to unlock the adaptive potential of microalgal genomes. PLoS ONE  9(3): e92533 (Link)
  • Spungin, D., Berman-Frank, I., Levitan, O.. Trichodesmium’s strategies to alleviate P-limitation in the future acidified oceans. Environmental Microbiology 10.1111/1462-2920.12424 (Link)
  • Brown, C.M., and K.D. Bidle. 2014. Attenuation of virus production at high multiplicities of infection in Aureococcus anophagefferens. Virology (http://dx.doi.org/10.1016/j.virol.2014.07.023).
  • Kendrick, B.J., G.R. DiTullio, T.J. Cyronak, P.A. Lee, J.M. Fulton, B.A.S. Van Mooy, K.D. Bidle. 2014. Temperature induced viral resistance in Emiliania huxleyi (Prymnesiophyceae) PLoS One 9(11): e112134. (Link)
  • Bidle, K.D. 2014. Elucidating marine virus ecology through a unified heartbeat. Proc. Natl. Acad. Sci. USA 111(44): 15606-15607. (Link)
  • Moniruzzaman, M., G.R. LeCleir, C.M. Brown, C.J. Gobler, K.D. Bidle, W.H. Wilson, and S.W. Wilhelm. 2014. Genome of Brown Tide virus (AaV), the little giant of the Megaviridae, elucidates NCLDV genome expansion and host-virus coevolution Virology (http://dx.doi.org/10.1016/j.virol.2014.06.031).
  • Lehahn, Y., I. Koren, D. Schatz, M. Frada, U. Sheyn, E. Boss, S. Efrati, Y. Rudich, M. Trainic, S. Sharoni, C. Laber, G.R. DiTullio, M.J.L. Coolen, A.M. Martins, B.A.S.  Van Mooy, K.D. Bidle, and A. Vardi. 2014. Life and death of a virally infected mesoscale phytoplankton bloom. Current Biology  (Link)
  • Lehahn, Y., I. Koren, Y. Rudich, K.D. Bidle, M. Trainic, J.M. Flores, S. Sharoni, A. Vardi. 2014. Decoupling atmospheric and oceanic factors affecting aerosol loading over a cluster of mesoscale North Atlantic eddies. Geophys. Res. Lett. 41(11): 4075-4081. (Link)
  • Lehahn, Y., I. Koren, D. Schatz, M. Frada, U. Sheyn, E. Boss, S. Efrati, Y. Rudich, M. Trainic, S. Sharoni, C. Laber, G.R. DiTullio, M.J.L. Coolen, A.M. Martins, B.A.S. Van Mooy, K.D. Bidle, and A. Vardi. 2014. Decoupling physical from biological processes to assess the impact of viruses on a mesoscale algal bloom. Current Biology 24: 2041-2046. (Link)
  • Keeling, P.J., et al (total of 77 authors). 2014. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biology 12(6): e1001889. (Link)
  • Kustka, A.B., Milligan, A.J., Zheng, H., New, A.M., Gates, C., Bidle, K.D. and Reinfelder, J.R., 2014. Low CO2 results in a rearrangement of carbon metabolism to support C4 photosynthetic carbon assimilation in Thalassiosira pseudonana. New Phytologist, 204(3), pp.507-520.(Link)
  • Ray, J.L., L. Haramaty, R. Thyrhaug, H. Fredricks, B. Van Mooy, A. Larsen, K.D. Bidle, and R.-A. Sandaa. 2014. Virus infection of Haptolina ericina and Phaeocystis pouchetii suggests evolutionary conservation of programmed cell death induction in marine haptophyte-virus interactions. J. Plankton Res. (doi: 10.1093/plankt/fbu029). (Link)
  • Rose, S.L., J. Fulton, C.M. Brown, F. Natale, B.A.S. Van Mooy, and K.D. Bidle. 2014. Isolation and characterization of lipid rafts in Emiliania huxleyi:  a role for membrane microdomains in host-virus Interactions. Environ. Microbiol. 16(4): 1150–1166. (Link)
  • Fulton, J.M,H.F. Fredricks,K.D. Bidle, A. Vardi, B.J. Kendrick,G.R. DiTullio and B.A.S. Van Mooy. 2014. Novel molecular determinants of viral susceptibility and resistance in the lipidome of Emiliania huxleyi. Environ. Microbiol. 16(4): 1137–1149. (Link)
  • Kuzminov F.I., Bolychevtseva Yu.V., Elanskaya I.V., Karapetyan N.V, 2014.Non-photochemical quenching in cells of Synechocystis PCC 6803 mutants deficient in both PSI/PSII and long-wavelength allophycocyanins. Journal of Photochemistry and Photobiology B: Biology 133, 153-160.(Link)
  • Kuzminov F.I.,  Shirshin E.A.,  Gorbunov M.Yu., Fadeev V.V., 2014. New optical approaches in studying photophysiological parameters of cyanobacteria in situ. Fundamental and applied hydrophysics. (accepted, in Russian).
  • Harel, A., Bromberg, Y., Falkowski, P. G., & Bhattacharya, D. 2014. Evolutionary history of redox metal-binding domains across the tree of life. Proceedings of the National Academy of Sciences, 111(19), 7042-7047. (Link)
  • Levitan, O., Dinamarca, J., Hochman, G., & Falkowski, P. G. (2014). Diatoms: a fossil fuel of the future. Trends in biotechnology, 32(3), 117-124. (Link)
  • Mass, T., Drake, J. L., Peters, E. C., Jiang, W., & Falkowski, P. G. 2014. Immunolocalization of skeletal matrix proteins in tissue and mineral of the coral Stylophora pistillata. Proceedings of the National Academy of Sciences, 201408621. (Link)
  • Senn, S., Nanda, V., Falkowski, P., & Bromberg, Y. 2014. Function-based assessment of structural similarity measurements using metal co-factor orientation. Proteins-Structure Function and Bioinformatics, 82(4), 648-656. doi: 10.1002/prot.24442 (Link)
  • Andrianasolo, E. H., Haramaty, L., White, E., Lutz, R., & Falkowski, P.G. 2014. Mode of Action of Diterpene and Characterization of Related Metabolites from the Soft Coral, Xenia elongata. Marine Drugs, 12(2), 1102-1115. doi: 10.3390/md12021102 (Link)
  • Falkowski, P.G. 2014. The role of minerals in the design of biological catalysts in microbes. In 2014 GSA Annual Meeting in Vancouver, British Columbia.(Link)
  • Schofield, O., Kohut, J., Saba, G., Xu, Y., Wilkin, J., Glenn, S. M. 2014. Ocean observing and prediction. 2014. In Encyclopedia of Natural Resources. Wang, Y. Q. (editor). Taylor Francis, New York City, NY. Doi:10.1018/E-ENRW-120048087 802-807.
  • Sipler, R. E., McGuinness, L. M., Kirkpatrick, G. J., Kerkhof, L. J., Schofield, O. 2014. Bacteriocidal effects of brevetoxin on natural bacterial communities. Harmful Algae doi:10.1016/j.hal.2014.04.009 (Link)
  • Swart, S., Liu, J., Bhaskar, P., Newmann, L., Finney, K., Meredith, M., Schofield, O. 2014. The SOOS Asian Workshop: Exploring possibilities for collaboration. Advances in Polar Science. doi: 10.13679/j.advps.2014.2.00001
  • Jiping, L., Swart, S., Bhaskar P. V., Newmann, L., Meredith, M., Schofield, O., Jianfeng, H.E. 2014. The SOOS Asian workshop on Southern Ocean research and observations. Advances in Polar Science. doi: 10.13679/j.advps.2014.2.00121 (Link)
  • Saba, G. K., Fraser, W. R., Saba, V. S., Iannuzzi, R. A., Coleman, K. E., Doney, S. C., Ducklow, H. W., Martinson, D. G., Miles, T. N., Patterson-Fraser, D. L., Stammerjohn, S. E., Steinberg, D. K., Schofield, O. 2014. Winter and spring controls on the summer food web of the coastal West Antarctic Peninsula. Nature Communications 5: 4318 doi: 10.1038/ncomms5318 (Link)
  • Constable A., Costa D., Murphy E., Hofmann E., Schofield O., Press A., Johnson N.M., Newman L. 2014. Assessing status and change in Southern Ocean ecosystems. 2014. In De Broyer C., Koubbi P., Griffiths H.J., Raymond B., Udekem d’Acoz C. d’, et al. (eds.). Biogeographic Atlas of the Southern Ocean. Scientific Committee on Antarctic Research, Cambridge, pp. 404-407 (Link)

2013

  • F.I. Kuzminov, C.M. Brown, V.V. Fadeev, M.Y. Gorbunov, 2013. Effects of metal toxicity on photosynthetic processes in coral symbiosis. Journal of Experimental Marine Biology and Ecology. Volume 416, 216-227. (Link)
  • Kim, J. D., Senn, S., Harel, A., Jelen, B. L., Falkowski, P. G. 2013. Discovering the electronic circuit diagram of life: Structural relatiuonships among transition metal binding sites in oxidoreductases. Philophical Transactions of the Royal Sociey. 368: 20120257. dx.doi.org/10.1098/rstb.2012.0257 (Link)
  • Oliver, M. J.,m Breece, M. W., Fox, D. A., Haulsee, D. E., Kohut, J. T., Manderson, J., Savoy, T. 2013. Shrinking the haystack: using an AUV in an integrated ocean observatory to map Atlantic sturgeon in the coastal ocean . Fisheries. 38:5, 210-216. dx.d Mass, T., Drake, J., Haramaty, L., Kim, J. D., Zelslon, E., Bhattacharya, D., Falkowski, P. G. 2013. Cloning and Characterization of four novel coral acid-rich proteins that precipitate carbonates in vitro . Current Biology http://dx.doi.org/10.1016/j.cub.2013.05.007 (Link)
  • Kim, J. D., Yee, N., Nanda, V., Falkowski, P. G. 2013. Anoxic photochemical oxidation of siderite generates molecular hydrogen and iron oxides . Proceedings of National Academy of Sciences.www.pnas.org/cgi/doi/10.1073/pnas.1308958110. oi.org/10.1080/03632415.2013.782861 (Link)
  • Quan, T. M., Wright, J. D., Falkowski, P. G. 2013. Co-variation of nitrogen isotopes and redox states through glacial-interglacial cycles in the Black Sea . Geochimica et Cosmochimica Acta. 112: 305-320.dx.doi.org/10.10 16/j.gca.2013.02 .029 (Link)
  • Schofield, O., Moline. M. A., Cahill, B., Frazer, T., Kahl, A., Oliver, M., Reinfelder, J., Glenn, S., Chant, R. 2013. Phytoplankton productivity in a turbid buoyant coastal plume . Continental Shelf Research. dx.doi.org/10.1016/j.csr.2013.02.005 (Link)
  • Frada, M. J., Burrows, E. H., Wyman, K. D., Falkowski, P. G. 2013. Quantum requirements for growth and fatty acid biosynthesis in the marine diatom Phaeodactylum tricornutum (Bacillariophyceae) in nitrogen replete and limited conditions . Journal of Phycology 49: 381-388 DOI: 10.1111/jpy.12046 (Link)
  • Oliver MJ ,Irwin A, Moline MA, Fraser W, Patterson D, Schofield O, Kohut J 2013 Adelie Penguin Foraging Location Predicted by Tidal Regime Switching PLoS ONE, Volume 8, Issue 1, e55163. (Link)
  • Mass et al., 2013. Cloning and Characterization of Four Novel Coral Acid-Rich Proteins that Precipitate Carbonates In Vitro,  Current Biology, http://dx.doi.org/10.1016/j.cub.2013.05.007. (Link)
  • Drake, J. L., Mass, T., Haramaty, L., Zelzion, E., Bhattacharya, D., & Falkowski, P. G. 2013. Reply to Ramos-Silva et al.: Regarding coral skeletal proteome. Proceedings of the National Academy of Sciences of the United States of America, 110(24), E2147-E2148. doi: DOI 10.1073/pnas.1304591110 (Link)
  • Guerra, L. T., Levitan, O., Frada, M. J., Sun, J. S., Falkowski, P. G., & Dismukes, G. C. 2013. Regulatory branch points affecting protein and lipid biosynthesis in the diatom Phaeodactylum tricornutum. Biomass & Bioenergy, 59, 306-315. doi: 10.1016/j.biombioe.2013.10. (Link)
  • Thamatrakoln, K., Bailleul, B., Brown, C. M., Gorbunov, M. Y., Kustka, A. B., Frada, M.,  Bidle, K. D. 2013. Death-specific protein in a marine diatom regulates photosynthetic responses to iron and light availability. Proceedings of the National Academy of Sciences of the United States of America, 110(50), 20123-20128. doi: DOI 10.1073/pnas.1304727110 (Link)
  • Falkowski P., Jelen B.: Microbial Genomes That Drive Earth’s Biogeochemical Cycles. In: Nelson K. (Ed.) Encyclopedia of Metagenomics: SpringerReference (www.springerreference.com). Springer-Verlag Berlin Heidelberg, 2013. DOI: 10.1007/SpringerReference_367744 2013-10-20 09:03:17 UTC
  • Harrold, J. W., Woronowicz, K., Lamptey, J. l., Awong, J., Baird, J., Moshar, A., Vittadello, M., Falkowski, P. G., Niederman, R. A. 2013. Functional interfacing of Rhodospirillum rubrum chrmatophores to a conducting support for capture and conversion of solar energy . The Journal of Physical Chemistry. dx.doi.org/10.1021/jp402108s (Link)
  • Bar-Zeev, E., I. Avishay, K.D. Bidle and I. Berman-Frank. 2013. Programmed cell death in the marine cyanobacterium Trichodesmium mediates carbon and nitrogen export. ISME Journal 7(12): 2340-2348. (Link)
  • Read, B., et al. (total of 73 authors). 2013. Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature. 499:209-213. (Link)
  • Seth-Pasricha, M., K.A. Bidle, and K.D. Bidle. 2013. Specificity of archaeal caspase activity in the extreme halophile Haloferax volcanii. Environ. Microbiol. Reports 5(2): 263-271. (Link)
  • Drake J.L., Mass T., Haramaty L., Zelzion E., Bhattacharya D., Falkowski P.G. 2013. Proteomic analysis of skeletal organic matrix from the stony coral Stylophora pistillata. PNAS 1301419110

2012

  • Saba GK, Schofield O, Torres JJ, Ombres EH, Steinberg DK (2012) Increased Feeding and Nutrient Excretion of Adult Antarctic Krill, Euphausia superba, Exposed to Enhanced Carbon Dioxide (CO2) . PLoS ONE 7(12): e52224. doi:10.1371/journal.pone.0052224 (Link)
  • Xu, Y., Cahill, B., Wilkin, J., Schofield, O. 2012. Role of wind in regulating phytoplankton blooms on the Mid-Atlantic Bight . Continental Shelf Research dx.doi.org/10.1016/j.csr.2012.09.011 (Link)
  • Andrianasolo, E. H., Haramaty, L., Rosario-Passapera, R., Vetriani, C., Falkowski, P. G., White, E., Lutz. 2012. Ammonficins C and D, Hydroxyethylamine chromene derivatives from a cultured marine hydrothermal vent bacterium, Thermovibrio ammonificans . Marine Drugs. 10: 2300-2311. doi:10.3390/md10102300
  • Saba, G., Steinberg, D. K. 2012. Abundance, composition, and sinking rates of fish fecal pellets in the Santa Barbara Channel . Scientific Reports. 2: 716. DOI: 10.1038/srep00716 (Link)
  • Miles, T., Glenn, S. M., Schofield, O. 2012. Temporal and spatial variability in fall storm induced sediment resuspension on the Mid-Atlantic Bight . Continental Shelf Research. doi.org/10.1016/j.csr.2012.08.006 (Link)
  • Oliver, M.J., M.A. Moline, I. Robbins, W. Fraser, D. Patterson, and O. Schofield. 2012. Letting penguins lead: Dynamic modeling of penguin locations guides autonomous robotic sampling. Oceanography 25(3):120–121, http://dx.doi.org/10.5670/oceanog.2012.84.(Link)
  • Rintoul, S.R., M.P. Meredith, O. Schofield, and L. Newman. 2012. The Southern Ocean Observing System. Oceanography 25(3):68–69, http://dx.doi.org/10.5670/oceanog.2012.76.
  • Lutz, R. A., Falkowski, P. G. 2012. A dive to Challenger deep . Science. doi: 10.1126/science.1222641 (Link)
  • Harel, A., Falkowski, P., Bromberg, Y. 2012. TrAnsFuSE refines the search for protein function: oxidireductases. Integrative Biology. DOI: 10.1039/c2ib00131d (Link)
  • Ducklow, H. D., Schofield, O., Vernet, M., Stammerjohn, S., Erickson, M. 2012. Multiscale control of bacterial production by phytoplankton dynamics and sea ice along the wester Antarctic Peninsula: A regional and decadal investigation . Journal of Marine Systems. doi:10.1016/j.j,arsys.2012.03.003 (Link)
  • Kim, J. D., Rodriguez-Granillo, Case, D. A., Nanda, V., Falkowski, P. G. 2012. Energetic selection of topology in ferredoxins. Plos Computational Biology. 8(4). doi:10.1371/journal.pcbi.1002463.g001(Link)
  • Falkowski, P. G. 2012. The power of plankton. Nature 483: 517-520.(Link)
  • Ducklow, H. W., Clarke, A., Dickhut, R., Doney, S. C., Geisz, H., Huang, K., Martinson, D. G., Meredith, M. P., Moeller, H. V., Montes-Hugo, M., Schofield, O., Stammerjohn, S. E. Steinberg, D., Fraser, W. 2012. The Marine Ecosystem of the West Antarctic Peninsula. In Antarctic Ecosystems: An Extreme Environment in a Changing World. Rogers, A. D., Johnston, N. M., Murphy, E. J., Clarke, A. (Eds). Wiley Blackwell, ISBN: 978-1-4051-9840-0. 564 pp.(Link)
  • Mass T, Drake JL, Haramaty L, Rosenthal Y, Schofield OME, et al. 2012. Aragonite Precipitation by ‘‘Proto-Polyps’’ in Coral Cell Cultures. PLoS ONE 7(4): e35049. doi:10.1371/journal.pone.0035049
  • Burrows, E.H., Bennette, N.B., Carrieri, D., Dixon, J.L., Brinker, A., Frada, M., Baldassano, S.N., Falkowski, P.G. and Dismukes, G.C., 2012. Dynamics of lipid biosynthesis and redistribution in the marine diatom Phaeodactylum tricornutum under nitrate deprivation. BioEnergy Research, 5(4), pp.876-885.  (Link)
  • Kuzminov F.I. , Karapetyan N.V., Rakhimberdieva M.G., Elanskaya I.V., Gorbunov M.Y.,  and V.V. Fadeev , 2012. Investigation of OCP-triggered dissipation of excitation energy in PSI/PSII-less Synechocystis sp. PCC 6803 mutant using non-linear fluorimetry. Biochim. Biophys. Acta 1817, 1012-1021.(Link)
  • Vardi, A., L. Haramaty, B.A.S. Van Mooy, H.F. Fredricks, S.A. Kimmance, A. Larsen, and K.D. Bidle. 2012. Host–virus dynamics and subcellular controls of cell fate in a natural coccolithophore population. Proc. Natl. Acad. Sci. USA 109(47): 19327-19332. (Link)
  • Bidle, K.D. and C.J. Kwityn. 2012. Assessing the role of caspase activity and metacaspase expression on viral susceptibility of the coccolithophore, Emiliania huxleyi. J. Phycol. 48(5): 1079-1089.(Link)
  • Frada, M.J., K.D. Bidle, I. Probert, C. de Vargas. 2012 In situ survey of life cycle phases of the coccolithophore Emiliania huxleyi (Haptophyta). Environ. Microbiol. 14(6):1558-1569. (Link)
  • Thamatrakoln, K., O. Korenovska, A.K. Niheu, and K.D. Bidle. 2012. Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana. Environ. Microbiol. 14(1): 67-81. (Link)

2011

  • Gorbunov, M., Kuzminov, F., Fadeev, V. V., Kim, J. D., Falkowski, P. 2011. A kinetic model of non-photochemical quneching in cyanobacteria . Biochimica et Biophysica Acta. 1807: 1591-1599. doi:10.1016/j.bbabio.2011.08.009 (Link)
  • Falkowski, P.G., Algeo, T., Codispoti, L., Deutsch, C., Emerson, S., Hales, B., Huey, R. B., Jenkins, W. J., Kump, L. R., Levin, L. A., Lyons, T. W., Nelson, N. B., Schofield, O., Summons, R., Talley, L. D., Thomas, E., Whitney, F., Pilcherm C. B. 2011. Ocean Deoxygenation: Past, Present, and Future. EOS, Transactions American Geophysical Union. 92(46): 409-411. (Link)
  • Koblizek, M., Janouskovec, J., Obomik, M., Johnson, J. H., Ferriera, S., Falkowski, P. G. 2011. Genome sequence of the marine photoheterotrophic bacterium Erythrobacter sp. Strain NAP1 . Journal of Bacteriology 193(20): 5881-5882 doi:10.1128/JB.05845-11 (Link)
  • Yan C, O Schofield, Z Dubinsky, D Mauzerall, P Falkowski, and M Gorbunov. 2011. Photosynthetic energy storage efficiency in Chlamydomonas reinhardtii, based on microsecond photoacoustics. Photosynthesis Research, 108(2-3), pp. 215-224. (Link)
  • Johnson-Worrell S. and M Gorbunov. 2011. Effects of Sn on the Primary and Secondary Photosynthetic Reactions. – Int. J. of Sustainable Water and Environmental Systems, 2(No. 2): 97-102. (Link)
  • T.Gostev, F.Kuzminov, V.Fadeev, M.Gorbunov. 2011. Aquatic Photosynthesizing Organisms Biophotonics: Fluorescent Diagnostic Methods. Photonics, 2: 72-81.
  • Ballantyne, F., Schofield, O., Levin, S. A. 2011. Featured Article: The emergence of regularity and variability in marine ecosystems: The combined role of physics, chemistry and biology . Scientia Marina. 75(4): 719-731. doi: 10.3989/scimar.2011.75n4719 (Link)
  • Barron, E. J., Fine, R. A., Schofield, O. 2011. Critical ocean infrastructure needs for the US in the year 2030 . Sea Technology. August: 17-21. (Link)
  • Xu, Y., Chant, R., Gong, D., Castelao, R., Glenn, S., Schofield, O. 2011. Seasonal variability of chlorophyll a in the Mid-Atlantic Bight . Continental Shelf Research doi:10.1016/j.csr.2011.05.019 (Link)
  • Tchernov, D., Kvitt, H., Haramaty, L., Bibby, T. S., Gorbunov, M. Y., Rosenfeld, H., Falkowski, P. G. 2011. Apoptosis amd the selective survival of host animals following thermal bleaching in zooxanthellate corals . Proceedings of the National Academy of Sciences. doi/10.1073/pnas.1106924108 (Link)
  • Cermeno, P., Lee, J., Wyman, K., Schofield, O., Falkowski, P. 2011. Competitive dynamics in two species of marine phytoplankton under non-equilibrium conditions.  Marine Ecology Progress Series. 429: 19-28. doi; 10.3354/meps09088 (Link)
  • Moeller, H. V., Johnson, M. D., Falkowski, P. G. 2011. Photoacclimation in the phototrophic marine ciliate Mesodinium rubrum (Ciliophora) Journal of Phycology DOI: 10.1111/j.1529-8817.2010.00954.x (Link)
  • Falkowski, P. G. 2011. The biological and geological contingencies for the rise of oxygen on Earth . Photosynthesis research 107: 7-10 doi: 10.1007/s11120-010-9602-4 (Link)
  • Andrianasolo, E.H. , Haramaty, L., McPhail, K.L. , White, E., Vetriani, C., Falkowski. P.G., Lutz, R. 2011. Bathymodiolamides A and B, Ceramide Derivatives from a Deep-Sea Hydrothermal Vent Invertebrate Mussel, Bathymodiolus thermophilus. J. Nat. Prod. 2011, 74, 842–846. (Link)
  • Thamatrakoln, K., Korenovska, O., Niheu, A.K. , and K.D. Bidle. 2011. Whole-genome expression analysis reveals a role for death-related genes in stress acclimation of the diatom Thalassiosira pseudonana. Environ. Microbiol. (doi:10.1111/j.1462-2920.2011.02468.x) (Link)
  • M.G. Rakhimberdieva, F.I. Kuzminov, I.V. Elanskaya, N.V. Karapetyan, 2011. Synechocystis sp. PCC 6803 mutant lacking both photosystems exhibits strong carotenoid-induced quenching of phycobilisome fluorescence. FEBS Letters, Volume 585, Issue 3, 585-589.(Link)
  • E.G. Maksimov, F.I. Kuzminov, I.V. Konyuhov, I.V. Elanskaya, V.Z. Paschenko, 2011. Photosystem 2 effective fluorescence cross-section of cyanobacterium Synechocystis sp. PCC6803 and its mutants. Journal of Photochemistry and photobiology B 104, 285-291.(Link)
  • Bidle, K.D. and A. Vardi. A chemical arms race at sea mediates algal host–virus interactions. 2011. Curr. Opin. Microbiol. 14(4): 449-457. (Link)
  • Whittaker, S., K.D. Bidle, A. Kustka, and P.G. Falkowski. 2011. Quantification of nitrogenase in Trichodesmium IMS 101: Implications for iron limitation of nitrogen fixation in the ocean. Environ. Microbiol. Reports 3(1):54-58 (Link)

2010

  • Buesseler, K. O., McDonnell, A. M. P., Schofield, O. Steinberg, D. K., Ducklow, H. W. 2010. High particle export over the continental shelf of the west Antarctic Peninsula . Geophysical Research Letters 37, L22606, doi:10.1029/2010GL045448 (Link)
  • Canfield, D. E., Glazer, A. N., Falkowski, P. G. 2010. The evolution and future of Earth’s nitrogen cycle . Science. 330, 192. doi: 10.1126/science.1186120 (Link)
  • Castelao, R., Glenn, S., Schofield, O. 2010. Temperature, salinity, and density variability in the central Middle Atlantic Bight . Journal of Geophysical Research. 115. C10005, doi:10.1029/2009JC006082 (Link)
  • Kahl, A. L., Schofield, O., Fraser, W. R. 2010. Autonomous gliders reveal features of the water column associated with foraging by Adelie pengiuns . Integrative and Compartitive Biology. doi: 10.1093/icb/icb098 (Link)
  • Vittadello, M., Gorbunov, M. Y., Mastrogiovanni, D. T., Wielunski, L. S., Garfunkel, E. L., Guerrero, F., Kirilovsky, D., Sugiura, M., Rutherford, A. W., Safari, A., Falkowski, P. G. 2010. Photoelectron generation by photosystem II core complexes tethered to gold surfaces . ChemSusChem 3: 471-475. DOI: 10.1002/cssc.200900255 (Link)
  • Schofield, O., Ducklow, H. W., Martinson, D. G., Meredith, M. P., Moline, M. A., Fraser, W. R. 2010. How Do Polar Marine Ecosystems Respond to Rapid Climate Change? Science 328, 1520 DOI: 10.1126/science.1185779 (Link)
  • Zhang, W. G., Wilkin, J. L., Schofield, O. 2010. Simulation of water age and residence time in New York Bight . Journal of Physical Oceanography. doi: 10.1175/2009JPO4249.1 (Link)
  • Benoit-Bird, K. J., Moline, M. A., Schofield, O. M., Robbins, I. C., Waluk, C. M. 2010. Zooplankton avoidance of a profiled open-path fluorometer . Journal of Plankton Research. doi:10.1093/plankt/fbq053 (Link)
  • Castelao, R., Chant, R., Glenn, S. M., Schofield, O. 2010. The effects of tides and oscillatory winds on the subtidal inner-shelf cross-shelf circulation. Journal of Physical Oceanography. 40: 775-788. doi: 10.1175/2009JPO4273.1 (Link)
  • Cermeno, P., de Vargas, C., Abrantes, F., Falkowski, P. G. 2010. Phytoplankton biogeography and community stability , PLoS ONE 5(4):e10037 doi:10.1371/journal.pone.0010037 (Link)
  • Montes-Hugo, M., C. Sweeney, S. C. Doney, H. Ducklow, R. Frouin, D. G., Martinson, S. Stammerjohn, and O. Schofield 2010. Seasonal forcing of summer dissolved inorganic carbon and chlorophyll a on the western shelf of the Antarctic Peninsula. Journal Geophysical Research, 115, C03024, doi:10.1029/2009JC005267. (Link)
  • Levitan, O., Brown, C.M., Sudhaus. S., Campbell, D., LaRoche, J. and Berman-Frank, I. 2010. Regulation of nitrogen metabolism in the marine diazotroph Trichodesmium IMS101 under varying temperatures and atmospheric CO2 concentrations. Environmental Microbiology 12(7): 1899-1912. (Link)
  • Oliver M.J.,O. Schofield and K. Bidle. 2010. Density dependent expression of a diatom retrotransposon. Marine Genomics 3(3-4):145-150 (doi:10.1016/j.margen.2010.08.006) (Link)
  • K.D. Bidle. 2010. Phytoplankton-bacteria interactions: Ectohydrolytic enzymes and their influence on biogeochemical cycling. Limnol. Oceanogr. e-Lectures 4 (http://www.aslo.org/lectures/index.html) (Link)
  • S. Whittaker*, K.D. Bidle, A. Kutska, and P.G. Falkowski. 2010. Quantification of nitrogenase in Trichodesmium IMS 101: Implications for iron limitation of nitrogen fixation in the ocean. Environ. Microbiol. Reports (doi: 10.1111/j.1758-2229.2010.00187.x) (Link)
  • K.A. Bidle, L. Haramaty, N. Baggett, J. Nannen, and K.D. Bidle. 2010. Tantalizing evidence for archaeal caspase-like protein expression and activity and its role in cellular stress response. Environ. Microbiol. 12(5): 1161-1172. (Link)

2009

  • Cermeno, P., Falkowski, P. G. 2009. Controls on diatom biogeography in the ocean . Science vol 325: 1539 doi: 10.1126/science.1174159 (Link)
  • Falkowski, P. G., Goodman, R. 2009. Editorial: Future energy institutes . Science. 325: 10.1126/science.1176998 (Link)
  • Godfrey, L. V., Falkowski, P. G. 2009. The cycling and redox state of nitrogen in the Archaean ocean . Nature Geoscience. DOI: 10.1038/NGEO633 (Link)
  • Montes-Hugo, M., Doney, S. C., Ducklow, H. W., Fraser, W., Martinson, D., Stammerjohn, S., Schofield, O. 2009. Recent changes in phytoplankton communities associated with rapid regional climate change along the West Antarctic Peninsula . Science. 323:1470-1474. 10.1126/science.1164533. (Link)
  • Montes-Hugo, M. Ducklow, H., Schofield, O. 2009. Contribution by different marine bacterial communities to particulate beam attenuation . Marine Ecology Progress Series. 379: 13-22. doi:10.3354/MEPS07883.(Link)
  • Dubinsky, Z., Schofield, O. 2009. Photosynthesis under extreme low and high light in the world’s oceans . Hydrobiologia. DOI 10.1007/s10750-009-0026-0
  • Thamatrakoln, K. Kustka, A. B. 2009. When to say when: can excessive drinking explain silicon uptake in diatoms? BioEssays 31:322–32, DOI 10.1002/bies.200800185 (Link)
  •  Richier, S., Kerros,M.E., de Vargas, C., Haramaty, L. Falkowski, P.G., Gattuso, J.P. 2009. Light-Dependent Transcriptional Regulation of Genes of Biogeochemical Interest in the Diploid and Haploid Life Cycle Stages of Emiliania huxleyi. Applied and Environmental Microbiology, p. 3366–3369.
  • Vardi, A, B. Van Mooy, H.F. Fredricks, K.J. Popendorf, J.E. Ossolinski, L. Haramaty, and K.D. Bidle. 2009.Viral glycosphingolipids induce lytic infection and cell death in marine phytoplankton. Science 326 (5954): 861-865. (Link)
  • Schootbrugge, B., Quan, T. M., Lindstrom, S., Puttmann, W., Heunisch, C. Pross, J., Fiebig, J., Petschick, R., Rohling, H. G., Richoz, S., Rosenthal, Y, Falkowski, P. G. 2009. Floral changes across the Triassic/Jurassic boundary linked to flood basalt volcanism. Nature Geoscience. DOI: 10.1038/NGE0577.
  • Andrianasolo, E.H., Haramaty, L., Rosario-Passapera, R., Bidle, K., White, E., Vetriani, C., Falkowski, P., Lutz, R. 2009. Ammonificins A and B, Hydroxyethylamine Chroman Derivatives from a Cultured Marine Hydrothermal Vent Bacterium, Thermovibrio ammonificans. J. Nat. Prod. 72: 1216–1219 DOI: 10.1021/np800726d
  • Johnson, M. D., Volker, J. V., Moellera, H. V., Lawsc, E., Breslauer, J., Falkowski, P. G. 2009. Universal constant for heat production in protists. Proceedings of National Academy of Sciences. www.pnas.org/cgi/doi/10.1073/pnas.0902005106
  • Quan, T.M., Falkowski, P.G. 2009. Redox control of N:P ratios in aquatic ecosystems. Geobiology 7:124-139 DOI: 10.1111/j.1472-4669.2008.00182.x
  • Falkowski, P. 2009. The marine carbon cycle. In The Princeton Guide to Ecology. S. Levin (ed) Princeton University Press. Princeton, Pp. 358-366.
  • Falkowski, P. 2009. The once and future ocean. Oceanography 22: 246-251.

2008

2007

  • Finkel, Z., J. Sebbo, S. Feist-Burkhardt, A.J. Irwin, M.E. Katz, O.M.E. Schofield, J.R. Young, P.G. Falkowski. 2007. A universal driver of macroevolutionary change in the size of marine phytoplankton over the Cenozoic. PNAS 104: 20416-20420. [Reprint Copy – PDF]
  • Lee, S., K.D. Bidle, D.R. Marchant, P.G. Falkowski. 2007. Fossil genes and microbes entombed in the oldest ice on earth. PNAS 104: 13455-13460. [Reprint Copy – PDF]
  • Shi, T., Y. Sun, and P.G. Falkowski. (2007) Effects of iron limitation on the expression of metabolic genes in the marine cyanobacterium Trichodesmium erythraeum IMS101. Env. Microbiol. doi:10.1111/j.1462-2920.2007.01406.x [Reprint Copy – PDF]
  • Reuer, M.K., Barnett, B.A., Bender, M.L., Falkowski, P.G., Hendricks, M.B. (2007) New estimates of Southern Ocean biological production rates from 02/Ar ratios and the triple isotope compositon of 02. Deep-Sea Res. I. 54: 951-974. [Reprint Copy – PDF]
  • Oliver, M.J., Petrov, D., Ackerly, D., Falkowski, P. Schofield, O.M. (2007) The mode and tempo of genome size evolution in eukaryotes. Genome Res. 17: 594-601.
    [Reprint Copy – PDF]
  • Berman-Frank, I., Rosenberg, G., Levitan, O., Haramaty, L., Mari, X. 2007. Coupling between autocatalytic cell death and transparent exopolymeric particle production in the marine cyanobacteria Trichodesmium. Environmental Microbiology. 9: 1415-1422.[Reprint Copy – PDF]
  • Berman-Frank, I., Quigg, A., Finkel, Z., Irwin, A., Haramaty, L. 2007. Nitrogen-fixation strategies and Fe requirements in cyanobacteria. Limnology and Oceanography. 52: 2260-2269. [Reprint Copy – PDF]
  • Bidle, K.D., L. Haramaty, J. Barcelos e Ramos, P. Falkowski. 2007. Viral activation and recruitment of metacaspases in the unicellular coccolithophore, Emiliania huxleyi. PNAS 104: 6049-6054. [Reprint Copy – PDF]
  • Falkowski, P.G. and Oliver, M.J. 2007. Mix and match: how climate selects phytoplankton. Nature Reviews Microbiol. Nature Reviews Microbiol. 5: 813-819. [Reprint Copy – PDF]
  • Andrianasolo, E., Haramaty, L., Degenhardt, K., Mathew, R., White, E. Lutz, R., Falkowski, P. (2007) Induction of apoptosis by diterpenes from the soft coral Xenia elongata. J. Nat. Prod. [Reprint Copy – PDF]
  • van de Schootbrugge, B., F. Tremolada, Y. Rosenthal, T,R, Bailey, S. Feist-Burkhardt, H. Brinkhuis, J. Pross, D.V. Kent, P.G. Falkowski. 2007. End-Triassic calcification crisis and blooms of organic-walled ‘disaster species’. Palaeogeography, Palaeoclimatology, Palaeoecology 244: 126-141. [Reprint Copy – PDF]
  • McGillicuddy, Jr. D.J., L.A. Anderson, N.R. Bates, T. Bibby, K.O. Buessler, C. Carlson, C. Davis, C. Ewart, P.G. Falkowski, S.A. Goldthwait, D.A. Hansell, W.J. Jenkins, R. Johnson, V.K. Kosnyrev, J.R. Ledwell, Q.P. Li, D.A. Siegel, D.K. Steinberg. 2007. Eddy-wind interactions stimulate extraordinary mid-ocean plankton blooms. Science 316: 1021-1026.
    [Reprint Copy – PDF]
  • Finkel, Z.V., A.S. Quigg, R.K. Chiampi, O.E. Schofield, P.G. Falkowski. 2007. Phylogenetic diversity in cadmium: phosphorus ratio regulation by marine phytoplankton. Limnol. Oceanogr. 52: 1131-1138. [Reprint Copy – PDF]
  • Milligan, A.J., I. Berman-Frank, G.C. Dismukes, P.G. Falkowski. 2007. Light-dependent oxygen consumption in nitrogen-fixing cyanobacteria plays a key role in nitrogenase protection. J. Phycol. 43: 845-852. [Reprint Copy – PDF]
  • Litchman, E., C.A. Klausmeier, O.E.M. Schofield, P.G. Falkowski. 2007. The role of functional traits and trade-offs in structuring phytoplankton communities: scaling from cellular to ecosystem level. Ecology Letters 10:1170-1181. (Link)
  • Falkowski, P.G. and J.A. Raven. 2007. Aquatic Photosynthesis (2nd edition). Princeton University Press. Princeton, 484 pp.
  • Falkowski, P.G. and A.H. Knoll (eds). 2007. The Evolution of Aquatic Photoautotrophs. Academic Press. New York, 456 pp.
  • Falkowski, P.G. and A.H. Knoll. 2007. An introduction to primary producers in the sea: who they are, what they do, and when they evolved. In The Evolution of Aquatic Photoautotrophs, P.G. Falkowski and A.H. Knoll (eds). Academic Press. New York, 456 pp.
  • Katz, M.E., K. Fennel, P.G. Falkowski. 2007. Geochemical and biological consequences of phytoplankton evolution. In The Evolution of Aquatic Photoautotrophs, P.G. Falkowski and A.H. Knoll (eds). Academic Press. New York, 456 pp.

2006

  • Hood, R,R, E. Lawson, R.A. Armstrong, N.R. Bates, C.W. Browne, CA. Carlson, F. Chaig, S.C. Doney, P.G. Falkowski, R.A. Feely, M.A.M. Friedrichs, M.R. Landry, J.K. Moore, D.M. Nelson, T.L. Richardson, B. Salihoglu, M.Schartau, D.A. Toole, J.D. Wiggert. 2006. Pelagic functional group modeling: progress, challenges and prospects. Deep-Sea Research II: 53: 459-512. [Reprint Copy – PDF]
  • Falkowski, P.G. 2006. Tracing oxygen’s imprint on Earth’s metabolic evolution. Science 311: 1724-1725. [Reprint Copy – PDF]
  • Behrenfeld, M.J., R.T. O’Malley, D.A. Siegel, C.R. McClain, J.L. Sarmiento, G.C. Feldman, A.J. Milligan, P.G. Falkowski, R.M. Letelier, E. Boss. (2006) Climate-driven trends in contemporary ocean productivity. Nature 444: 752-755. [Reprint Copy – PDF]
  • Finkel, Z. V., Quigg, A. S., Raven, J. A., Reinfelder, J. R., Schofield , O ., Falkowski P. G.(2006). Irradiance and the elemental stoichiometry of marine phytoplankton. Limnology and Oceanography. 51: 2690-2701.[Reprint Copy – PDF]
  • Tremolada F., E. Erba, B. van de Schootbrugge, and M. Mattioli (2006). The calcareous phytoplankton response to the late Callovian-early Oxfordian cooling phase. Marine Micropaleontology 59: 197-209. [Reprint Copy – PDF]
  • Litchman, E., C.A. Klausmeier, J.R. Miller, O.M. Schofield, P.G. Falkowski. 2006. Multi-nutrient, multi-group model of present and future oceanic phytoplankton communities. Biogeosciences. 3: 585-606. [Reprint Copy – PDF]
  • Irwin, A.J., Z.V. Finkel, O.M.E. Schofield, P.G. Falkowski. 2006. Scaling-up from nutrient physiology to the size-structure of phytoplankton communities. J. Plankton Res. 28: 459-471. [Reprint Copy – PDF]
  • Koblizek, M., P.G. Falkowski, and Z.S. Kolber. (2006) Diversity and distribution of photosynthetic bacteria in the Black Sea. Deep-Sea Res. II 53 1934-1944.
    [Reprint Copy – PDF]
  • Wolfe-Simon, F., Starovoyotov, V., Reinfelder, J., Schofield, O., P. Falkowski. 2006. Localization and role of manganese superoxide dismutase in a marine diatom. Plant Physiol. 142: 1701-1709. [Reprint Copy – PDF]
  • Ragueneau, O., S. Schultes, K. Bidle, P. Claquin and B. Moriceau. 2006. Si and C interactions in the world ocean: Importance of ecological processes and implications for the role of diatoms in the biological pump. Global Biogeochemical Cycles 20: GB4SO2, doi:10.1029/2006GB002688.  [Reprint Copy – PDF]

2005

  • Jiang, L., O. Schofield, and P. G. Falkowski (2005). Adaptive evolution of phytoplankton cell size. Am. Nat. 166: 496-505. [Reprint Copy – PDF]
  • Fennel, K., M. Follows, and P. G. Falkowski (2005). The co-evolution of the nitrogen, carbon and oxygen cycles in the Proterozoic ocean. Am. J. Sci. 305: 526-545. [Reprint Copy – PDF]
  • van de Schootbrugge, B., J. M. McArthur, T. R. Bailey, Y. Rosenthal, J. D. Wright, and K. G. Miller. 2005. Toarcian oceanic anoxic event: An assessment of global causes using belemnite C isotope records. Paleoceanography: 20 (in press). [Reprint Copy – PDF]
  • Shi, T., T. S. Bibby, L. Jiang, A. J. Irwin, and P. G. Falkowski (2005). Protein interactions limit the rate of evolution of photosynthetic genes in cyanobacteria. Mol. Biol. Evol. 22: 2179-2189. [Reprint Copy-PDF]
  • Finkel, Z. V. , M. E. Katz, J. D. Wright, O.M.E. Schofield and P. G. Falkowski (2005). Cenozoic climate and the macroevolution of marine diatom cell size. Proc. Nat. Acad. Sci. USA. 102: 8927-8932. [Reprint Copy – PDF]
  • Giordano, M., Y.-B. Chen, M. Koblizek, and P. G. Falkowski (2005). Regulation of nitrate reductase in Chlamydomonas reinhardtii by the redox state of the plastoquinone pool. Eur. J. Phycol. 40: 345-352. [Reprint Copy – PDF]
  • Falkowski, P. G., M. E. Katz, A Milligan, K. Fennel, B. Cramer, M. P. Aubry, R. A. Berner, M. Novacek and W. M. Zapole (2005). The rise of atmospheric oxygen over the past 205 million years and the evolution of large placental mammals. Science 309: 2202-2204. [Reprint Copy-PDF]
  • Ananayev, G., Z. S. Kolber, D. Klimov, P. G. Falkowski, J. A. Berry, U. Rascher, R. Martin, and B. Osmond (2005). Remote sensing of heterogeneity in photosynthetic efficiency, electron transport and dissipation of excess light in Populus deltoids stands under ambient and elevated CO2 concentrations, and in a tropical forest canopy, using a new laser-induced fluorescence transient device. Global Change Biology 11: 1195-1206. [Reprint Copy-PDF]
  • O. Schofield and P.G. Falkowski. 2005. The role and evolution of superoxide dismutase in algae. J. Phycol. 41:453-465. [Reprint Copy – PDF] This is an electronic version of an article published in Journal of Phycology ©2005, the Phycological Society of America.
  • van de Schootbruge, B, TR Bailey, Y Rosenthal, ME Katz, JD Wright, KG Miller, S Faust-Burkhardt and PG Falkowski. 2005. Early Jurassic climate change and the radiation of organic walled phytoplankton in the Tethys ocean. Paleobiol. 31:73-97. (Link)
  • Wolfe-Simon, F., O. Schofield and P.G. Falkowski. 2005. The role and evolution of superoxide dismutase in algae. J. Phycol. 41:453-465. [Reprint Copy – PDF] This is an electronic version of an article published in Journal of Phycology ©2005, the Phycological Society of America.
  • Jiang, L. and P. J. Morin. 2005. Predator diet breadth influences the relative importance of bottom-up and top-down control of prey. The American Naturalist 165: 350-363. [Reprint Copy – PDF]
  • Frost, P., MA Evans-White, ZV Finkel, TC Jensen, V Matzek. 2005. Are you what you eat? Physiological constraints on organismal stoichiometry in an
    elementally imbalanced world. Oikos 109: 18-28. [Reprint Copy – PDF]

2004

  • Katz, M.E., Z.V. Finkel, D. Grzebyk, A.H. Knoll, and P.G. Falkowski (2004). Evolutionary trajectories and biogeochemical impacts of marine eukaryotic phytoplankton. Annu. Rev. Ecol. Evol. Syst. 35: 523-556. [Reprint Copy – PDF]
  • Katz , M.E. , J.D. Wright, K.G. Miller, B.S. Cramer, K. Fennel and P.G. Falkowski. 2004. Biological overprint of the geological carbon cycle. Marine Geol. 217: 323-338. [Reprint Copy – PDF]
  • Falkowski, P.G. and C. Davis. 2004. Natural proportions. Nature 431: 131. [Reprint Copy – PDF]
  • ZV Finkel, AJ Irwin and O Schofield. 2004. Resource limitation alters the 3/4 size-scaling of metabolic rates in phytoplankton. Mar. Ecol. Prog. Ser. 273: 269-279. [Reprint Copy – PDF]
  • Jiang, L. and P. J. Morin. 2004. Productivity gradients cause positive diversity-invasibility relationships in microbial communities. Ecology Letters 7: 1047-1057 [Reprint Copy – PDF]
  • Falkowski, P. G. and D. Tchernov. 2003. Human footprint on the ecological landscape. In. Earth System Analysis for Sustainabilty, ed, J. Schellnhuber. Springer-Verlag , Berlin . [Reprint Copy – PDF]
  • Tchernov, D., M. Gorbunov, C. de Vargas, S. Yadav, A. Milligan, M. Haggblom, and P. Falkowski. 2004. Membrane lipids of symbiotic algae are diagnostic of sensitivity to thermal bleaching in corals. Proc. Nat. Acad. Sci. 101: 13531-13535. [Reprint Copy – PDF]
  • Bidle, K.D. and P.G. Falkowski. 2004. Cell death in planktonic, photosynthetic microorganisms. Nature Reviews Microbiology 2: 643-655. [Reprint Copy – PDF]
  • Berman-Frank, I, KD Bidle, L Haramaty, PG Falkowski. 2004. The demise of the marine cyanobacterium, Trichodesmium spp., via an autocatalyzed cell death pathway. Limnol. Oceanogr. 49: 997-1005. [Reprint Copy – PDF]
  • Sun, Y, E.W. Castner Jr., C.L. Lawson, and P.G. Falkowski. 2004. Biophysical characterization of natural and mutant fluorescent proteins cloned from zooxanthellate corals. FEBS Letters 570: 175-183. [Reprint Copy – PDF]
  • Jiang, L. and Kulczycki, A. 2004. Competition, predation and species responses to environmental change. OIKOS 106: 217-224. [Reprint Copy – PDF]
  • Falkowski, PG, ME Katz, AH Knoll, A Quigg, JA Raven, O Schofield, FJR Taylor . 2004. The evolution of modern eukaryotic phytoplankton. Science 305: 354-360. [Reprint Copy – PDF]
  • Tozzi, S., O. Schofield, PG Falkowski. 2004. Historical climate change and ocean turbulence as selective agents for two key phytoplankton functional groups. Marine Ecology Progress Series. 274: 123-132. [Reprint Copy – PDF]
  • Levy, O. et al. 2004. Diurnal hysteresis in coral photosythesis. Mar.Ecol. Prog. Ser. 268: 105-117. [Reprint Copy –PDF]
  • Gervais, F, U Riebesell, MY Gorbunov. 2004. Changes in primary productivity and chlorophyll a in response to iron fertilization in the Southern Polar Frontal Zone. Limnol. Oceanog. 1324-1335. [Reprint Copy –PDF]
  • Coale, KH et al. 2004. Southern Ocean Iron Enrichment Experiment: Carbon Cycling in High- and Low-Si Waters. Science 304: 408-412 [Reprint Copy –PDF]
  • Falkowski, PG, and C. de Vargas. 2004. Shotgun sequencing in the sea: a blast from the past? Science 304: 58-60. [Reprint Copy –PDF]
  • Falkowski, PG, O Schofield, ME Katz, B van de Schootbrugge, and A Knoll. 2004. Why is the land green and the ocean red? In Coccolithophorids. Ed. H. Thierstein and J. Young. Springer-Verlag. Berlin . [Reprint Copy – PDF]
  • Jiang, L and P Morin. 2004. Temperature-dependent interactions explain unexpected responses to environmental warming in communities of competitors. Journal of Animal Ecology 73: 569-576. [Reprint Copy – PDF]
  • Jiang, L and N. Shao. 2004. Red environmental noise and the appearance of delayed density dependence in age-structured populations. Proc. Royal Soc. London 271: 1059-1064. [Reprint Copy – PDF]
  • Lesser, MP, CH Mazel, MY Gorbunov and PG Falkowski. (2004) Discovery of symbiotic nitrogen-fixing cyanobacteria in corals. Science 305: 997-1000. [Reprint Copy – PDF]
  • Chen, Y-B, D. Durnford, M. Koblizek, and P. G. Falkowski. 2004. Plastid regulation of Lhcb1 transcription in the chlorophyte alga, Dunaliella tertiolecta. Plant Physiol. 136: 3737-3750. [Reprint Copy – PDF]

2003

  • Falkowski, P.G. 2003. The biogeochemistry of primary productivity in the sea. In Treastise of Geochemistry. [Ed] W.H. Schlesinger.
  • Koblizek M, etal. 2003. Isolation and characterization of Erythrobacter sp. strains from the upper ocean. Arch Microbiol. 180: 327-338. [Reprint Copy – PDF]
  • Segovia , M., L. Haramaty, J.A. Berges and P.G. Falkowski. 2003. Cell Death in the Unicellular Chlorophyte Dunaliella tertiolecta. A Hypothesis on the Evolution of Apoptosis in Higher Plants and Metazoans. Plant Physiology. [Reprint Copy –PDF]
  • Grzebyk, D., O. Schofield, C. Vetriani, and P. G. Falkowski. 2003. The Mesozoic radiation of eukaryotic algae: The portable plastid hypothesis. J. Phycol. 39:259-267. [Reprint Copy – PDF]
  • Berman-Frank, I. , P. Lundgren, and P.G. Falkowski. 2003. Nitrogen fixation and photosynthetic oxygen evolution in cyanobacteria. Res. Microbiol. 154:157-164. [Reprint Copy – PDF]
  • Falkowski PG, Laws EA, Barber RT, Murray JW. 2003. Phytoplankton and their role in Primary, New, and Export Production. (Chapter 4) In Ocean Biogeochemistry: The Role of the Ocean Carbon Cycle in Global Change. [Ed] MJR Fasham. Global Change – The IGBP Series. [Reprint Copy – PDF]
  • Quigg, A. Finkel, Z.V. Irwin, A.J. Reinfelder, J.R. Rosenthal, Y. Ho,T-Y. Schofield, O. Morel, F.M.M. and Falkowski, P.G. 2003 The evolutionary inheritance of elemental stoichiometry in marine phytoplankton.Nature 425: 291-294. [Reprint Copy – PDF]
  • Ho, T-Y. Quigg, A. Finkel, Z.V. A. Milligan, K. Wyman, Falkowski, P.G. and Morel, F.M.M. 2003. The elemental composition of some marine phytoplankton. J. Phycology 39: 1145-1159.
  • Beardall, J. and Quigg, A. and Raven, J.A. 2003 Oxygen consumption: Photorespiration and chlororespiration. (Chapter 8) In Photosynthesis in the Algae. [Eds.] T. Larkum, JA. Raven, and S. Douglas. Advances in Photosynthesis Series, Kluwer Academic Publishing. pp. 157-181.(Link)
  • Quigg, A. and Beardall, J. 2003 Protein turnover in relation to maintenance metabolism at low photon flux in two marine microalgae. Plant, Cell and Environment 26: 1-10. [Reprint Copy – PDF]
  • Quigg, A. Beardall, J. and Wydrzynski, T. 2003 An investigation of the photosynthetic O2 – evolving reactions in two marine microalgae as a function of the photon flux during growth. Functional Plant Biology 30: 301-308. [Reprint Copy – PDF]

2002

  • Falkowski, P. G. 2002. The Ocean’s Invisible Forest . Scientific American 287: 38-45. [Reprint Copy – PDF]
  • M. Debora Iglesias-Rodriguez, C. W. Brown, S.C. Doney, J. Kleypas, D. Kolber, Z. Kolber, P.K. Hayes, and P. G. Falkowski. 2002. Representing key phytoplankton functional groups in ocean carbon cycle models: coccolithophorids. Global Biogiochemical Cycles 16: [Reprint Copy – PDF]
  • Gorbunov, M and P.G. Falkowski. 2002. Photoreceptors in Cnidarian hosts allow symbiotic corals to sense the light of the blue moon. Limnol. Oceanogr. 47:309-315 [Reprint Copy – PDF]
  • Chisholm, S.W., P.G. Falkowski and J. Cullen. 2002. Is Ocean Fertilization Credible and Creditable? Science 296:467-468.
  • Berman-Frank, I. and P.G. Falkowski. 2002. Evolution of Nitrogen Fixation. Science. 295:798-799. [Reprint Copy – PDF]
  • Charles H. Mazel, C.H., Lesser, M.P., Barry, T.M., Farrell, J.H., Gorbunov, M.Y., Wyman, K.D., and Paul G. Falkowski. 2002. Green fluorescent proteins in Carribean corals. Limnol. Oceanogr. 48: 402-411. [Reprint Copy – PDF]
  • Grzymski, Joe, Oscar M. Schofield, Paul G. Falkowski, and Joan M. Bernhard. 2002. The function of plastids in the deep-sea benthic foraminifer, Nonionella stella. Limnol. Oceanogr. 47: 1569-1580. [Reprint Copy – PDF]
  • Sun, Y., E. Castner, and P.G. Falkowski. Biochemical and biophysical characterization of novel fluorescent proteins from corals. J. Biol. Chem. (Reprint Copy – PDF)
  • Quigg, A. Beardall, J. and Wydrzynski, T. 2002 An investigation of the photosynthetic O2 evolving reactions in two marine microalgale as a function of the photon flux during growth. Functional Plant Biology. (Reprint Copy – PDF)
  • Campbell, J., Falkowski, P.G., and others. 2000. Comparison of algorithms for estimating ocean primary production from surface chlorophyll, temperature and irradiance. Global Biogeochem. Cycles. 16: 10.1029/2001GB001444. [Reprint Copy – PDF]

2001

  • Falkowski, P.G. (2001) Biogeochemical cycles. In: Encyclopedia of Biodiversity. S.A. Levin, ed. Academic Press, 1: 437-453. [Reprint Copy – PDF]
  • Z. V. Finkel and A.J. Irwin. 2001. Light absorption and the filter amplification correction: species-specific and size-specific effects. Journal of Experimental Marine Biology and Ecology, 259: 51-61 [Reprint Copy – PDF]
  • Chisholm, S.W., P.G. Falkowski and J. Cullen. 2001 Dis-crediting Ocean Fertilization. Science. 294: 309-310. [Reprint Copy – PDF]
  • Ilana Berman-Frank, Pernilla Lundgren, Yi-Bu Chen, Hendrik Ku¬pper, Zbigniew Kolber, Birgitta Bergman, and Paul Falkowski. 2001. Segregation of Nitrogen Fixation and Oxygenic Photosynthesis in the Marine Cyanobacterium Trichodesmium. Science 294: 1534-1537. [Reprint Copy – PDF]
  • Litchman, Elena and Christopher A. Klausmeier. 2001. Competition of Phytoplankton under Fluctuating Light. American Naturalist 157: 171-187. [Reprint Copy – PDF]
  • Gorbunov, M.Y., Z.S. Kolber, M.P.Lesser, and P.G. Falkowski. 2001. Photosynthesis and photoprotection in symbiotic corals. Limnol. Oceanogr. 46(1):75-85. href=”http://marine.rutgers.edu/ebme/html_docs/reprints/GorbunovKolber_LO46_75-85.pdf” [Reprint Copy -PDF]
  • Behrenfeld, M. and others. 2001. Biospheric responses on ENSO time scales. Science 291: 2594-2597. [Reprint Copy – PDF]
  • Berman- Frank, I. , J. Cullen, Y. Hareli, R. Sherrell, and P. G. Falkowski. 2001. Iron availability, cellular iron quotas, and nitogen fixation in Trichodesmium. Limnol Oceanogr. 46(6): 1249-1260. [Reprint Copy – PDF]
  • Kolber, Z.S. et al. 2001. Contribution of Aerobic Photoheterotrophic Bacteria to the Carbon Cycle in the Ocean. Science 292: 2492-2496. [Reprint Copy – PDF]
  • Falkowski, PG. And Y. Rosenthal. 2001. Biological diversity and resource plunder in the geological record: Casual correlations or causal relationships? Proc. Nat. Acad. Sci. USA 98: 4290-4292. [Reprint Copy – PDF]
  • Segovia , M., L Haramaty, Y. Chen, T. Shi, J. A. Berges and P.G. Falkowski. 2001. Caspases and cell death in unicellular algae: The evolution of apoptosis. Science. [Reprint Copy – PDF]
  • Doney, S.C., J.A. Kleypas, J.L.Sarmiento and P.G. Falkowski. 2001. The U.S. JGOFS Synthesis and Modeling Project, an Introduction. Deep-Sea Res. II 49:1-20. [Reprint Copy – PDF]
  • Stoll, H.M., Y. Rosenthal, and P. G. Falkowski. 2001. Climate proxies from Sr/Ca of coccolith calcite: Calibrations from continuous culture of Emiliania huxleyi. Geochim. Cosmochim. Acta. 66:927-936. [Reprint Copy – PDF]
  • Finkel, Z.V. 2001. Light absorption and size scaling of light-limited metabolism in marine diatoms. Limnol. Oceanogr. 46(1): 86-94. [Reprint Copy – PDF]
  • Cullen, Jay T., Y. Rosenthal, and P.G. Falkowski. 2001. The effect of anthropogenic CO2 on the carbon isotopic composition of marine phytoplankton. Limnol. Oceanogr. 46(4): 996-998. [Reprint Copy – PDF]
  • Gao, Y., Y. Kaufman, D. Tanre, D. Kolber and P.G. Falkowski. 2000. Seasonal distributions of atmospheric iron fluxes to the global ocean. Geophys. Res. Lett. 28: 29-34. [Reprint Copy – PDF]

2000

  • Z. V. Finkel and A.J. Irwin. 2000. Modelling size-dependent photosynthesis: light absorption and the allometric rule. Journal of theoretical Biology, 204: 361-369. [Reprint Copy – PDF]
  • Laws, E.A., P.G. Falkowski, W.O. Smith, Jr. and J.J. McCarthy. 2000. Temperature effects on export production in the open ocean. Global Biogeochem. Cycles 14:1231-1246. [Reprint Copy – PDF]
  • Gorbunov, M.Y., P.G. Falkowski and Z. S. Kolber. 2000. Measurement of photosynthetic parameters in benthic organisms using a SCUBA-based fast repetition rate fluorometer. Limnol. Oceanogr. 45: 242-245. [Reprint Copy – PDF]
  • Kolber, Z.S., C. van Dover, RA Niederman, and P.G. Falkowski. 2000. Bacterial photosynthesis in surface waters of the open ocean. Nature 407: 177-179. [Reprint Copy – PDF]
  • Falkowski, P.G. 2000. Rationalizing elemental ratios in unicellular algae. J. Phycol. 36: 3-6. [Reprint Copy – PDF]
  • Falkowski, P. G. and others. 2000. The global carbon cycle: A test of our knowledge of the Earth as a system. Science 290: 291-294. [Reprint Copy – PDF]

1999

  • Behrenfeld, M. J., and Z. S. Kolber. 1999 Widespread iron limitation in the South Pacific Science. 283, 840-843. [Reprint Copy – PDF]
  • Behrenfeld, M.J., O. Prasil, Z.S. Kolber, M. Babin and P.G. Falkowski. 1999. Compensatory changes in Photosystem II electron turnover rates protect photosynthesis from photoinhibition. Photosyn. Res. 58: 259-268. [Reprint Copy – PDF]
  • Subramaniam, A., E.J. Carpenter, D. Karenz and P.G. Falkowski. 1999. Bio-optical properties of the marine diazotrophic cyanobcteria Trichodesmium spp. I. Absorption and photosynthetic action spectra. Limnol. Oceanogr. 44: 618-627. [Reprint Copy – PDF]
  • Raven, J.A. and P.G. Falkowski. 1999. Oceanic sinks for atmospheric CO2. Plant Cell Environ. 22:741-755. [Reprint Copy – PDF]
  • Gorbunov, M.Y., Z.S. Kolber and P.G. Falkowski. 1999. Measuring photosynthetic parameters in individual algal cells by Fast Repetition Rate Fluorometry. Photosyn. Res. 62: 141-153. [Reprint Copy – PDF]

1998

  • Falkowski, P., R. Barber, V. Smetacek, 1998 Biogeochemical controls and feedbacks on ocean primary production. Science. 281: 200-206. [Reprint Copy – PDF]
  • Sukenik, A., J. C. Schneider, P. G. Roessler, A. Livine, T. Berner, Z. S. Kolber, K. Wyman, O. Prasil, and P. G. Falkowski. Photosynthetic characterization of mutant of Nanochloris deficient in the synthesis of eicosapentaenoic acid. 1998. Israel J. Plant Sci. 46, 101-108.
  • Prasil, O., Z. S. Kolber, and P.G. Falkowski. Measurements of variable fluorescence using fast repetition rate techniques. II. Modulation of quantum yields by the Qb binding site. Submitted to Photosynt. Res.
  • Kolber, Z. S., O. Prasil, and P. G. Falkowski. Measurements of variable chlorophyll fluorescence using fast repetition rate techniques. I. Defining methodology and experimental protocols. 1998. Biochem. Biophys. Acta 1367, 88-106. [Reprint Copy – PDF]
  • Behrenfeld, M.B., O. Prasil, Z. S. Kolber, M. Babin, and P. G. Falkowski. Compensatory changes in photosystem II electron turnover rates protect photosynthesis from photo inhibition. Photosynth. Res. 58:1-10.
  • Dale, R. H., K. R. Arrigo, Z. S. Kolber, M. Gosselin, and C. W. Sullivan. 1998. Photophysiological evidence of nutrient limitation of platelet ice algae in McMurdo Sound, Antarctica . J. Phycology, 34, 788-787
  • Flagg, Ch. N., Z. S. Kolber, and D. Wallace. 1998. Cold anticyclonic eddies formed from cold pool water in the southern Middle Atlantic Bight. Cont. Shelf Res., 1839-1867
  • C.B. Field, M.J. Behrenfeld, J.T. Randerson, P.G. Falkowski. 1998. Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281: 237-240. [Reprint Copy – PDF]
  • Berges and Falkowski. 1998. Physiological stress and cell death in marine phytoplankton : induction of proteases in response to nitrogen or light limitation. Limnol. Oceanogr. 43: 129-135. [Reprint Copy – PDF]

1997

  • M.J. Behrenfeld & P.G. Falkowski. 1997. A consumer’s guide to phytoplankton primary productivity models. Limnol. Oceanogr. 42(7): 1479-1491. [Reprint Copy – PDF]
  • M.J. Behrenfeld & P.G. Falkowski. 1997. Photosynthetic rates derived from satellite-based chlorophyll concentration. Limnol. Oceanogr. 42:1-20 [Reprint Copy – PDF]
  • Falkowski, P.G., J.A. Raven, 1997a Aquatic Photosynthesis. Blackwell Scientific Publishers, Oxford , pp. 375.
  • Falkowski, P.G., J.A. Raven, 1997b The physics and physiology of photosynthesis in aquatic ecosystems. J. Phycol. 33: 1085-1086.
  • Falkowski, P.G., M.J. Behrenfeld, W.E. Esaias, W. Balch, J.W. Campbell, R.L. Iverson, D.A. Kiefer, A. Morel, & J. Yoder. 1997. Satellite primary productivity data and algorithm development: A Science plan for Mission to Planet Earth. SeaWiFS Technical Report Series. NASA Tech. Mem. #104566, Vol. 42.
  • Boyd, P. W., J. Aiken, and Z. S. Kolber. 1997. Comparison of radiocarbon and fluorescence-based pump and probe measurements of phytoplankton. Mar. Ecol. Progr. Ser. 149, 215-226.
  • Falkowski, P.G., 1997a Evolution of the nitrogen cycle and its influence on the biological sequestration of CO2 in the ocean. Nature. 387: 272-275. [Reprint Copy – PDF]
  • Falkowski, P.G., 1997b The paradox of carbon dioxide efflux. Current Biology. 7: R637-R639. [Reprint Copy – PDF]
  • Robinson, D. H., Z. S. Kolber, and C. W. Sullivan. 1997. Photophysiology and photoacclimation in surface sea algae from McMurdo Sound, Antarctica . Mar. Ecol. Progr. Ser. 147, 243-246.
  • R.C. Swartz, S.P Ferraro, J.O. Lamberson, F.A. Cole, R.J. Ozretich, B.L. Boese, D.W. Schults, M. Behrenfeld & G.T Ankley. (1997) Photoactivation and toxicity of mixtures of PAH compounds in marine sediment. Env. Tox. Chem. 10:2151-2157.

1996

  • Berges, J.A., D.O. Charlebois, D.C. Mauzerall, P.G. Falkowski. 1996. Differential effects of nitrogen limitation on photosynthetic efficiency of photosystems I and II in microalgae. Plant Physiol. 110: 689-696. [Reprint Copy – PDF]
  • Polívka, T., Pšencík, J., Kroh, P., Engst, D., Komenda, J., Prášil, O., Falkowski, P.G., Hála, J. (1996) Hole-burning study of energy transfer in antenna proteins of Dunaliella tertiolecta affectd by iron limitation. Molecular Crystals and Liquid Crystals Science and Technology Section A Molecular Crystals and Liquid Crystals 291: 111-117.
  • Behrenfeld, M. J., A. J. Bale, Z. S. Kolber, J. Aiken, and P.G. Falkowski. 1996. Confirmation of iron limitation of phytoplankton photosynthesis in the equatorial Pacific Ocean . Nature 383, 508-511.
  • Prasil, O., Z.S. Kolber, J. A. Berry, and P. G. Falkowski. 1996. Cyclic electron flow around Photosystem II in vivo. Photosynth. Res. 48, 395-410.
  • Babin, M., A. Morel, H. Claustre, A. Bricaud, Z.S. Kolber, and P. G. Falkowski. 1996. Nitrogen- and irradiance-dependent quantum yield of carbon fixation in eutrophic, mesotrophic, and oligotrophic marine systems. Deep-Sea Research 43, 1241-1272. [Reprint Copy – PDF]
  • J.T. Hardy, A. Hanneman, M.J. Behrenfeld & R. Horner. 1996. Environmental biogeography of phytoplankton in the Southeast Pacific Ocean . Deep-Sea Res. 43(10):1-13.

1995

  • Falkowski, P.G., 1995 Ironing out what controls primary production in the nutrient rich waters of the open ocean. Global Change Biology. 1: 161-163.
  • Vassiliev, I. R., Z. S. Kolber, D. Mauzerall, V.K. Shukla, K. D. Wyman, and P.G. Falkowski. 1995. Effects of iron limitation on photosystem II composition and energy trapping in Dunaliella tertiolecta. Plant Physiol. 109, 963-972.
  • Falkowski, P.G and Z. S. Kolber. 1995. Variations in chlorophyll fluorescence yields in phytoplankton in the world oceans. Aust. J. Plant. Physiol. 22, 341-355.
  • Vassiliev, I.R., et al.1995. Effects of iron limitation on photosystem II composition and light utilization in Dunaliella tertiolecta. Plant Physiol. 109: 963-972. [Reprint Copy – PDF]

1994

  • Falkowski, P.G., 1994 The role of phytoplankton photosynthesis in global biogeochemical cycles. Photosyn. Res. 39: 235-258.
  • Falkowski, P.G., P.E. Biscaye, C. Sancetta, 1994a The lateral flux of biogeneic particles from the eastern North American continental margin to the North Atlantic Ocean. Cont Shelf Res. 41: 583-601.
  • Falkowski, P.G, Z. S. Kolber, and D. Mauzerall. 1994. A comment on the Call to throw away your fluorescence induction apparatus. Biophys. J. 66, 923-925.
  • M.J. Behrenfeld, D.R.S Lean & H. Lee II. 1995. Ultraviolet-B radiation effects on inorganic nitrogen uptake by natural assemblages of oceanic plankton. J. Phycol. 31:25-36
  • Greene, R.M., Z. S. Kolber, D.G. Swift, N.W. Tindale, and P.G. Falkowski. 1994. Physiological limitation of phytoplankton photosynthesis in the Eastern Equatorial Pacific determined from variability of the quantum yield of fluorescence. Limnol. Oceanogr. 39, 1061-1074. [Reprint Copy – PDF]
  • Olaizola, M., J. Laroche, Z. S. Kolber, and P.G. Falkowski. 1994. Nonphotochemical Fluorescence Quenching and the Diadinoxanthin Cycle in Marine Phytoplankton. Photosynth. Res. 41, 357-370.
  • Vassiliev, I. R., O. Prasil, K. D. Wyman, Z. S. Kolber, A. K. Hanson, J. E. Prentice, and P. G. Falkowski. 1994. Inhibition of PSII photochemistry by PAR and UV radiation in natural phytoplankton communities. Photosynth. Res. 42, 51-64.
  • Polewski, K., S., L. Kramer, Z. S. Kolber, J. G. Trunk, D. C. Monteleone, and J. C. Sutherland. 1994. Time-resolved fluorescence using synchrotron radiation excitation: a powered fourth-cavity improves pulse stability. Rev. Sci. Instr. 65, 2562-2567.
  • Martin, J.H., K. H. Coale, Z. S. Kolber, et al. 1994. Testing the iron hypothesis in ecosystems of the Pacific Ocean . Nature 371, 123-129.
  • Kolber Z. S., R. T. Barber, K. H. Coale, S. E. Fitzwater, R. M. Greene, K. S. Johnson, S. Lindley, and P. G. Falkowski. 1994. Iron limitation of phytoplankton photosynthesis in the Equatorial Pacific Ocean. Nature 371, 145-149.

1993

  • Falkowski, P.G., Z. Dubinsky, L. Muscatine, L. McCloskey, 1993 Population control in symbiotic corals. BioScience. 43: 606-611.
  • Falkowski, P.G., K. Kolber, 1993 Estimation of phytoplankton photosynthesis by active fluorescence. Internat. Con. Explor. Sea. Symp. 197: 92-103.
  • Kolber, Z. S. and P. G. Falkowski. 1993. Use of active fluorescence to estimate phytoplankton photosynthesis in situ. Limnol. Oceanogr. 38, 1646-1665. [Reprint Copy – PDF]
  • Geider, R. J., R. M. Greene., Z. S. Kolber, H. MacIntyre, and P.G. Falkowski. 1993. Fluorescence assessment of the maximum quantum efficiency of photosynthesis in the western North Atlantic . Deep-Sea Res. 40, 1205-1224.
  • M.J. Behrenfeld, H. Lee II & L.F. Small. 1993. Interactions between nutritional status and long- term responses to ultraviolet-B radiation stress in a marine diatom. Mar. Biol. 118:523-530.
  • M.J. Behrenfeld, J.W. Chapman, J.T. Hardy & H. Lee II. 1993. Is there a common response to ultraviolet-B radiation by marine phytoplankton? Mar. Ecol. Prog. Ser. 102:59-68.
  • M.J. Behrenfeld, J.T. Hardy, H. Gucinski, A. Hanneman, H. Lee II & A. Wones. 1993. Effects of ultraviolet-B radiation on primary production along latitudinal transects in the South Pacific Ocean . Mar. Env. Res. 35:349-363.

1992

  • Falkowski, P.G., 1992a Biotechnology and global climate change. Current opinion in biotechnology. 3: 286-290.
  • Falkowski, P.G., 1992b A carbon budget for the northeast continental shelf ecosystem: Results of the Shelf Edge Exchange Process Studies. In: K. Sherman, L. M. Alexander and B. D. Gold (eds.) Food Chains, Yields, Models, and Management of Large Marine Ecosystems. Westview Press, San Francisco . pp. 35-48.
  • Falkowski, P.G., 1992c Molecular ecology of phytoplankton photosynthesis. Primary Productivity and Biogeochemical Cycles in the Sea: 47-67.
  • Falkowski, P.G., C. Wilson, 1992 Phytoplankton productivity in the North Pacific ocean since 1900 and implications for absorption of anthropogenic CO2. Nature. 358: 741-743.
  • Falkowski, P.G., A.D. Woodhead, 1992 Primary Productivity and Biogeochemical Cycles in the Sea. Plenum Press, New York . pp. 550.
  • Falkowski, P.G., 1992d Molecular ecology of phytoplankton photosynthesis. In: P. G. Falkowski and A. Woodhead (eds.) Primary productivity and biogeochemical cycles in the sea. Plenum Press. pp. 47-67.
  • Falkowski, P.G., 1992e Phytoplankton Photosynthesis in the Ocean in relation to the Global Carbon Cycle. N. Murata (ed.), Research in Photosynthesis. 4: 803-810.
  • Falkowski, P. G., Y. Kim, Z. S. Kolber, C. Wilson, C. Wirick, and R. Cess. 1992. Natural versus antropogenic factors affecting low-level cloud albedo over the North Atlantic . Science 256, 1311-1313.
  • Falkowski, P.G., R. Greene, R. Geider, 1992a Physiological limitations on phytoplankton productivity in the ocean. Oceanography. 5(2): 84-91.
  • M.J. Behrenfeld, J.T. Hardy, & H. Lee II. 1992. Chronic effects of ultraviolet-B radiation on growth and cell volume of Phaeodactylum tricornutum (Bacillariophyceae). J. Phycol. 28:757- 760.
  • Greene, R. M., R. J. Geider, Z. S. Kolber, and P. G. Falkowski. 1992. Iron-induced changes in light harvesting and photochemical conversion processes in eucaryotic marine algae. Plant Physiol. 100, 565- 575.

1991

  • Falkowski, P.G., 1991 Species variability in the fractionation of 13C and 12C by marine phytoplankton. J. Plankton. Res. 13: 21-28.
  • Falkowski, P.G., S. Demers, L. Legendre, 1991a Concluding remarks: promises and limitations of individual cell and particle analysis. In: S. Demers (ed.) Particle Analysis in Oceanography, Series G ed, vol. 27. Springer-Verlag , Berlin . pp. 403-408.
  • Falkowski, P.G., D. Ziemann, Z. Kolber, P.K. Bienfang, 1991b Nutrient pumping and phytoplankton response in a subtropical mesoscale eddy. Nature. 352: 544-551.
  • Falkowski, P.G., D. Ziemann, Z. Kolber, P.K. Bienfang, 1991c Role of eddy pumping in enhancing primary production in the ocean. Nature. 352: 55-58.
  • Falkowski, P.G., J. LaRoche, 1991a Acclimatation to spectral irradiance in algae (minireview). J. Phycol. 27: 8-14.
  • Falkowski, P.G., J. LaRoche, 1991b Acclimation to spectral irradiance in algae. J. Phycol. 27: 8-14.
  • Falkowski, P.G., J. LaRoche, 1991c Adaptation to spectral irradiance in unicellular algae. J. Phycol. 27: 8-14.
  • Falkowski, P.G., L. J., 1991 Molecular biology in studies of ocean processes. International Review of Cytology. 128: 261-303.
  • Chowdhury, F.N., Z. S. Kolber, and M. D. Barkley. 1991. Monte Carlo convolution method for simulation and analysis of fluorescence decay data. Rev. Sci. Instrum. 62 (1), 47-52.

1990

  • Falkowski, P.G., Z. Kolber, 1990 Phytoplankton photosynthesis in the Atlantic Ocean as measured from a submersible pump and probe fluorometer in situ. In: M. Baltscheffsky (ed.) Current research in photosynthesis IV. Kluwer. pp. 923-926.
  • Falkowski, P.G., L.M. Kirschner, 1990 Ocean Biology and Global Climate. Natural Science: 284-291.
  • Kolber, Z. S, K. D. Wyman, and P. G. Falkowski. 1990. Natural variability in photosynthetic energy conversion efficiency: a field study in the Gulf of Maine . Limnol. Oceanogr. 35, 72-79. [Reprint Copy – PDF]
  • Falkowski, P.G., P.L. Jokiel, R.A. Kinzie, 1990 Irradiance and Corals. Coral Reefs: 89-107.

1989

  • Falkowski, P.G., A. Sukenik, R. Herzig, 1989 Nitrogen limitation in Isochrysis galbana (Haptophyceae). II. Relative abundance of chloroplast proteins. J. Phycol. 25: 471-478.
  • M.J. Behrenfeld & J.W Chapman. 1990. Our disappearing ozone shield. Current 10(3):13-17. 1988
  • Falkowski, P.G., C.N. Flagg, G.T. Rowe, S.L. Smith, T.E. Whiteledge, C.D. Wirick, 1988a The fate of a spring phytoplankton bloom: export or oxidation? Cont. Shelf Res. 8(5-7): 457-484.
  • Kolber, Z. S., J. Zehr, and P. G. Falkowski. 1988. Effects of growth irradiance and nitrogen limitation on photosynthetic energy conversion in Photosystem II. Plant Physiol. 88, 923-929.
  • Falkowski, P.G., Z. Kolber, Y. Fujita, 1988b Effect of redox state on the dynamics of Photosystem II during steady-state photosynthesis in eucaryotic algae. Biochim. Biophys. Acta. 933: 432-443.
  • Falkowski, P.G., Z. Kolber, Y. Funita, 1988c Effect of redox state on the dynamics of Photosystem II during steady-state photosynthesis in eucaryotic algae. Biochim. Biophys. Acta. 933: 432-443.
  • Berner T., Z. Dubinsky, P.G. Falkowski, K. Wyman, 1989. Photoadaptation and the “package” effect in Dunaliella tertiolecta (Chlorophyceae). J Phycol. 25: 70-78.

1987

  • Falkowski, P.G., Y. Fujita, 1987 Effect of light state transitions on the apparent absorption cross section of photosystem II in Chlorella. In: J. Biggins (ed.) Progress in Photosynthesis Research, vol. II. Dordrecht , Mortinus Nijhoff. pp. 737-740.

1986

  • Falkowski, P.G., Y. Fujita, A.C. Ley, D. Mauzerall, 1986a Evidence for cyclic electron flow around photosystem II in Chlorella pyrenoidosa. Plant Physiol. 81: 310-312.
  • Falkowski, P.G., Y. Fujita, A.C. Ley, D.C. Mauzerall, 1986b Evidence for cyclic electron flow around photosystem II in Chlorella pyrenoidosa. Plant Physiol. 81: 310-312.
  • Falkowski, P.G., K. Wyman, A.C. Ley, D. Mauzerall, 1986c Relationship of steady state photosynthesis to fluorescence in eucaryotic algae. Biochim. Biophys. Acta. 849: 183-192.
  • Falkowski, P.G., K. Wyman, A.C. Ley, D.C. Mauzerall, 1986d Relationship of steady state photosynthesis to fluorescence in eucaryotic algae. Biochim. Biophys. Acta. 849: 183-192.
  • Kolber, Z. S. and M. D Barkley. 1986. Comparison of approaches to the instrumental response function in fluorescence decay measurements. Anal. Biochemistry 152, 6-21.

1985

  • Falkowski, P., D.A. Kiefer, 1985a Chlorophyll a fluorescence in phytoplankton: Relationship to photosynthesis and biomass. Group For Primary Productivity Gap, Second International Workshop Held At The National Oceanographic Institute, Haifa , Israel In April May. 7: 715-731.
  • Falkowski, P.G., D.A. Kiefer, 1985b Chlorophyll a fluorescence in phytoplankton: Relationship to photosynthesis and biomass. J. Plankton Res. 7: 715-731.
  • Falkowski, P.G., Z. Dubinski, G. Santostefan, 1985a Light enhanced dark respiration in phytoplankton. Limnol. 22: 2830-2833.
  • Falkowski, P.G., Z. Dubinsky, G. Santostefano, 1985b Light-enhanced dark respiration in phytoplankton. Int. Ver. Theor. Angew. Limnol. Verh. 22: 2830.
  • Falkowski, P.G., Z. Dubinsky, K. Wyman, 1985c Growth-irradiance relationships in phytoplankton. Limnol. Oceanogr. 30: 311-321.