2015 – The Environmental Biophysics and Molecular Ecology Program

Levitan, O., Dinamarca, J., Zelzion, E., Gorbunov, M. Y., & Falkowski, P. G. 2015. An RNAi knock‐down of nitrate reductase enhances lipid biosynthesis in the diatom Phaeodactylum tricornutum. The Plant Journal. (Link)
Bailleul, B., Berne, N., Murik, O., Petroutsos, D., Prihoda, J., Tanaka, A., Falkowski, P.G.… & Finazzi, G. 2015. Energetic coupling between plastids and mitochondria drives CO2 assimilation in diatoms. Nature, 524(7565), 366-369. (Link)
Falkowski, P. G. 2015. From Light to Life. Origins of Life and Evolution of Biospheres, 45(3), 347-350 (Link)
Casey, J. R., Falkowski, P. G., & Karl, D. M. 2015. Substrate selection for heterotrophic bacterial growth in the sea. Marine Chemistry. (Link)
McNutt, M. K., Abdalati, W., Caldeira, K., Doney, S. C., Falkowski, P. G., Fetter, S., … & Wilcox, J. 2015. Climate Intervention: Carbon Dioxide Removal and Reliable Sequestration (Link)
Cermeno, P., Falkowski, P. G., Romero, O. E., Schaller, M. F., & Vallina, S. M. 2015. Continental erosion and the Cenozoic rise of marine diatoms. Proc Natl Acad Sci U S A, 112(14), 4239-4244. doi: 10.1073/pnas.1412883112 (Link)
Harel, A., Karkar, S., Cheng, S., Falkowski, P. G., & Bhattacharya, D. 2015. Deciphering Primordial Cyanobacterial Genome Functions from Protein Network Analysis. Current Biology, 25(5), 628-634. doi: 10.1016/j.cub.2014.12.061 (Link)
Levitan, O., Dinamarca, J., Zelzion, E., Lun, D. S., Guerra, L. T., Kim, M. K., . . . Falkowski, P. G. (2015). Remodeling of intermediate metabolism in the diatom Phaeodactylum tricornutum under nitrogen stress. Proc Natl Acad Sci U S A, 112(2), 412-417. doi: 10.1073/pnas.1419818112 (Link)
Tuorto, S. J., Brown, C. M., Bidle, K. D., McGuinness, L. R., & Kerkhof, L. J. (2015). BioDry: An Inexpensive, Low-Power Method to Preserve Aquatic Microbial Biomass at Room Temperature. PloS one, 10(12), e0144686. (Link)
Collins, J.R., B.R. Edwards, K. Thamatrakoln, J.R. Valdes, J.E. Ossolinski, G.R. DiTullio, K.D. Bidle, S.C. Doney, R.G. Keil, and B.A.S. Van Mooy. 2015. The multiple fates of sinking particles in the North Atlantic Ocean. Global Biogeochem. Cycles 29 (9): 1471–1494. (Link)
Harvey, E.L., K.D. Bidle and M.D. Johnson. 2015. Consequences of strain variability and calcification in Emilania huxleyi on microzooplankton grazing. J. Plankton Research 37(6): 1137–1148.(Link)
Sharoni, S., M. Trainic, D. Schatz, Y. Lehahn, J.M. Flores, K.D Bidle, S. Ben-Dor, Y. Rudich, I. Koren, A.Vardi. Infection of bloom-forming phytoplankton by aerosolized marine viruses. 2015. Proc. Natl. Acad. Sci. USA 112(21): 6643-6647.(Link)
Edwards, B.R., K.D. Bidle, and B.A.S. Van Mooy. 2015. Dose-dependent polyunsaturated-aldehyde regulation of microbial activity on sinking particles in the ocean Proc. Natl. Acad. Sci. USA 112(19): 5909-5914. (Link)
Bidle, K.D. 2015. The molecular ecophysiology of programmed cell death in marine phytoplankton. Annu. Rev. Mar. Sci., 7: 341-375. (Link)
Cavnaugh, M., Abdala, F. N., Ducklow, H., Glover, D., Fraser, W., Martinson, D., Stammerjohn, S., Schofield, O., Doney, S. 2015. Effect of continental shelf canyons on phytoplankton biomass and community composition along the western Antarctic Peninsula. Marine Ecology Progress Series. doi: 10.3354/MEPS11189Steinberg, D. M., Ruck, K. E., Gleiber, M., Garzio, L., Cope, J. S., Bernard, K. S., Stammerjohn, S. E., Schofield, O., Quetin, L. B., Ross, R. M. 2015. Long-term (1993-2013) changes in macrozooplankton off the Western Antarctic Peninsula. Deep Sea Research II. doi:10.1016/j.dsr.2015.02.009 (Link)
Brum, J. R., Hurwitz, B. L., Schofield, O., Ducklow, H. W., Sullivan, M. B. 2015. Seasonal time bombs: Dominant temperate viruses affect Southern Ocean microbial dynamics. The ISME Journal. doi:10.1038/ismej.2015.125 (Link)
Schofield, O., Miles, T., Aldercamp A-C, Lee, S, Haskin. C., Roaglsky E., Sipler, R., Sherrell R., Yager, P. 2015. In situ phytoplankton distributions in the Amundsen Sea polynya measured by autonomous gliders. Elementa: Science of the Anthropocene. doi: 10.12952/journal.elementa.000073 (Link)
Stukel, M. R., Asher, E., Couto, N., Schofield, O., Strebel, S., Tortell, P., Ducklow, H. W. 2015. The imbalance of new and export production in the Western Antarctic Peninsula, a potentially “leaky” ecosystem. Global Biogeochemical Cycles. Doi:10.1002/2015GB005211 (Link)
Alderkamp, A-C., van Dijken, G. L., Lowry, K. E., Connelly, T. L., Lagerstrom, M., Sherrell, R. M., Haskins, T., Rogalsky, E., Schofield, O., Stammerjohn, S. E., Yager, P. L., Arrigo, K. R. 2015. Iron availability drives phytoplankton photosynthesis rates in the Amundsen Sea Polynya, Antarctica. Elementa. doi: 10.12952/journal.elementa.000043 (Link)
Steinberg, D. M., Ruck, K. E., Gleiber, M., Garzio, L., Cope, J. S., Bernard, K. S., Stammerjohn, S. E., Schofield, O., Quetin, L. B., Ross, R. M. 2015. Long-term (1993-2013) changes in macrozooplankton off the Western Antarctic Peninsula. Deep Sea Research II. doi:10.1016/j.dsr.2015.02.009 (Link)
Brum, J. R., Hurwitz, B. L., Schofield, O., Ducklow, H. W., Sullivan, M. B. 2015. Seasonal time bombs: Dominant temperate viruses affect Southern Ocean microbial dynamics. The ISME Journal. doi:10.1038/ismej.2015.125 (Link)
Gleiber, M. R., Steinberg, D. K., Schofield, O. 2015. Copepod summer grazing impact and fecal pellet production along the Western Antarctic Peninsula. Journal of Plankton Research doi:10.1093/plankt/fbv070 (Link)
Meredith, M., Lee, S., Wåhlin, A., Schofield, O., Ducklow, H., Newman, L, Lee, H. 2015. The interdisciplinary marine system of the Amundsen Sea, Southern Ocean: recent advances and the need for sustained observations. Deep Sea Research Part II Topical Studies in Oceanography DOI: 10.1016/j.dsr2.2015.12.002 (Link)
Kuzminov F.I., M. Y. Gorbunov, 2015. Energy dissipation pathways in Photosystem 2 of the diatom, Phaeodactylum tricornutum, under high-light conditions. Photosynth. Res., 2016 Feb;127(2):219-35. doi: 10.1007/s11120-015-0180-3. Epub 2015 Jul 29. (Link)
Bolychevtseva Y.V., F. I. Kuzminov, I. V. Elanskaya, M. Y. Gorbunov, N. V. Karapetyan, (2015) Photosystem activity and state transitions of the photosynthetic apparatus in the cyanobacterium Synechocystis PCC 6803 mutants with different redox state of the plastoquinone pool. – Biochemistry, Vol. 80, No. 1, pp. 50-60. (Link)