2016 – The Environmental Biophysics and Molecular Ecology Program

Bhattacharya, D., Agrawal, S., Aranda, M., Baumgarten, S., Belcaid, M., Drake, J. L., Falkowski, P.G. … & Kamel, B. 2016. Comparative genomics explains the evolutionary success of reef-forming corals. eLife, 5, e13288. (Link)
Spungin, D., U. Pfreundt, H. Berthelot, S. Bonnet, D. AlRoumi, F. Natale, W.R. Hess, K.D. Bidle, and I. Berman-Frank.2016. Mechanisms of Trichodesmium bloom demise within the New Caledonia Lagoon. Biogeosciences 13: 4187–4203. (Link)
Hirsh, D.J., K.M. Fomchenko, E.M. Jordan, B. Schieler, and K.D. Bidle. 2016. A liposome-encapsulated spin trap for the detection of nitric oxide. Free Radic. Biol. Med. 16: 199-210 (Link)
Bidle, K.D. 2016. Programmed cell death in unicellular phytoplankton. Curr. Biol. 26(13): R594–R607 (Link)
Brussaard, C.P.D., K.D. Bidle, C. Pedrós-Alió, and C. Legrand. 2016. The interactive microbial ocean. Nature Microbiol. 2: 16255 (Link)
Nissimov J.I. & Bidle K.D. 2016. Stress, death, and the biological glue of sinking matter. Journal of Phycology, 53 (2), 241–244.(Link)
Nissimov J.I., Napier J.A., Allen M.J. & Kimmance S.A. 2016. Intragenus competition between coccolithoviruses: an insight on how a select few can come to dominate many. Environmental Microbiology, 18(1), 133–145.(Link)
Seroka, G., Miles, T., Xu, Y., Kohut, J., Schofield, O., Glenn, S. 2016. Hurricane Irene (2011) Hurricane Irene sensitivity to stratified coastal ocean cooling. 2016. Monthly Weather Review http://dx.doi.org/10.1175/MWR-D-15-0452.1
Schofield, O., Newman, L., Bricher, P., Constable, A., Swart, S., Wahlin, A. 2016. Moving towards implementation of a Southern Ocean Observing System. Marine Technology Society 50(3): 63-68.(Link)
Carvalho, F., Kohut, J., Oliver, M. J., Sherrell, R. M., Schofield, O. 2016. Mixing and phytoplankton dynamics in a submarine canyon in the West Antarctic Peninsula. Journal of Geophysical Research DOI: 10.1002/2016JC011650. (Link)
Obryk, M. K., Doran, P. T., Friedlaender, A. S., Gooseff, M., Priscu, J. C., Schofield, O., Stammerjohn, S. E., Steinberg, D. K., Ducklow, H. W. 2016. Responses of Antarctic marine and freshwater ecosystems to changing ice conditions. Bioscience 66: 864-879. doi:10.1093/biosci/biw109 (Link)
Yager, P. L., Sherrell, R. M., Stammerjohn S. E., Ducklow, H. W., Schofield, O., Ingall, E. D., Wilson, S. E., Lowry, K. E., Williams, C. M., Riemann, L., Bertilsoosn, S., Nielsen, T. G., Alderkamp, A-C., Dinaquet, J., Kjellerup, S., Logares, R., Melara, A. J., Mu, L., Newstead, R. G., Post, A., Richert, I., Swalethorp, R., van Dijken, G. 2016. A carbon budget for the Amundsen Sea Polynya, Antarctica: Estimating net community production and export in a highly productive polar ecosystem. Elementa: Science of the Anthropocene. doi: 10.12952/journal.elementa.000140 (Link)
Mass, T., Putnam, H. M., Drake, J. L., Zelzion, E., Gates, R. D., Bhattacharya, D., & Falkowski, P. G. 2016. Temporal and spatial expression patterns of biomineralization proteins during early development in the stony coral Pocillopora damicornis. Proceedings of the Royal Society B-Biological Sciences, 283(1829), 10. doi: 10.1098/rspb.2016.0322 (Link)
Jelen, B. I., Giovannelli, D., & Falkowski, P. G. 2016. The Role of Microbial Electron Transfer in the Coevolution of the Biosphere and Geosphere. Annual Review of Microbiology, 70, pp. 45-62. (Link)
Kim, J., Fabris, M., Baart, G., Kim, M. K., Goossens, A., Vyverman, W., Falkowski, P.G. & Lun, D. S. 2016. Flux balance analysis of primary metabolism in the diatom Phaeodactylum tricornutum. The Plant Journal, 85(1), 161-176. (Link)
Lin H., Kuzminov F.I., Park J., Lee S.H., Falkowski P.G., and Gorbunov M.Y. 2016. The fate of photons absorbed by phytoplankton in the global ocean – Science, 351(6270), pp. 264-267. (Link)
Glenn, S. M., Miles, T. N., Seroka, G. N., Xu, Y., Yu, F., Forney, R. K., Roarty, H., Schofield, O., Kohut, J. 2016. Stratified coastal ocean interactions with tropical cyclones. Nature Communications DOI:10.1038/ncomms10887 (Link)
Newmann, L., Schofield, O., Wahlin, A., Constaple, A., Swart, S., Williams, M., Mazloff, M., Firing, Y., Bricher, P. 2016. Understanding the Southern Ocean through sustained observations. Bulletin of the Australian Meteorological and Oceanographic Society. 28: 170-174.(Link)
Constaple, A. J., Costa, D. P., Schofield, O., Newman, L., Urban, E. R., Fulton, B., Melbourne-Thomas, J., Ballerini, T., Boyd, P. W., Brandt, A., de la Mare, B., Edwards, M., Eleaume, M., Emmerson, L., Fennel, K., Fielding, S., griiths, H., Gutt, J., Hindell, M. A., Hofmann, E. E., Jennings, S., Jensen, O., Kohut, J., La, H., Manderson, J., McCurdy, A., Mitchell, G., Moltmann, T., Muelbert, M., Murphy, E., Press, T., Raymond, B., Reid, K., Reiss, C., Rice, J., Salter, I., Smith, D., Song, S., Southwell, C., Swadling, K., Van de Putte, A., Willis, Z. Determining essential variables (ecosystem Essential Ocean Variables – eEOVs) for observing dynamics and change in marine ecosystems using the Southern Ocean as a case study. Journal of Marine System Journal of Marine Systems, doi: 10.1016/j.jmarsys.2016.05.003 (Link)
Li, Z., Cassar, N., Huang, K., Schofield, O., Ducklow, H. 2016. Interannual variability in net community production at the Western Antarctic Peninsula region (1997-2014). Journal of Geophysical Research DOI:10.1002/2015JC011378 (Link)
Vittadello, M., Woronowicz, K., Chhowalla, M., Falkowski, P.G. and Harrold Jr, J.W., Research Foundation of The City University Of New York and Rutgers, 2016. Chemically Modified Graphene. U.S. Patent Application 15/155,695.
Harel, A., Häggblom, M.M., Falkowski, P.G. and Yee, N., 2016. Evolution of prokaryotic respiratory molybdoenzymes and the frequency of their genomic co-occurrence. FEMS microbiology ecology, 92(12), p.fiw187.(Link)
Fountain, A.G., Saba, G., Adams, B., Doran, P., Fraser, W., Gooseff, M., Obryk, M., Priscu, J.C., Stammerjohn, S. and Virginia, R.A., 2016. The impact of a large-scale climate event on Antarctic ecosystem processes. BioScience, 66(10), pp.848-863. (Link)
Voloshina O.V., Bolychevtseva Y.V., Kuzminov F.I., Gorbunov M.Y., Elanskaya I.V., and Fadeev V.V. (2016) Photosystem II activity of wild type Synechocystis PCC 6803 and its mutants with different plastoquinone pool redox states. – Biochemistry, 81 (8), 858-870. (Link)